Tk03429, Tk03429 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03429
Unique NameTk03429
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length942
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 70..168
e-value: 7.9E-15
score: 55.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 68..167
score: 16.865
IPR000618Insect cuticle proteinPFAMPF00379Chitin_bind_4coord: 644..692
e-value: 4.4E-5
score: 23.8
coord: 742..790
e-value: 4.4E-5
score: 23.8
coord: 848..896
e-value: 4.4E-5
score: 23.8
IPR000618Insect cuticle proteinPROSITEPS51155CHIT_BIND_RR_2coord: 845..918
score: 12.168
IPR000618Insect cuticle proteinPROSITEPS51155CHIT_BIND_RR_2coord: 535..613
score: 10.642
IPR000618Insect cuticle proteinPROSITEPS51155CHIT_BIND_RR_2coord: 739..817
score: 11.2
IPR000618Insect cuticle proteinPROSITEPS51155CHIT_BIND_RR_2coord: 641..716
score: 11.036
NoneNo IPR availableGENE3D1.10.340.70coord: 1..55
e-value: 1.1E-11
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..942
NoneNo IPR availablePANTHERPTHR12236STRUCTURAL CONTITUENT OF CUTICLEcoord: 701..799
coord: 802..940
coord: 598..698
coord: 492..595
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 463..942
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..441
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..462
IPR015416Zinc finger, H2C2-type, histone UAS bindingPFAMPF09337zf-H2C2coord: 17..52
e-value: 3.3E-8
score: 33.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 64..176
e-value: 5.4E-23
score: 83.2
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 70..209

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold110_size354795-snap-gene-0.17-mRNA-1maker-scaffold110_size354795-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03429 ID=Tk03429|Name=Tk03429|organism=Tigriopus kingsejongensis|type=polypeptide|length=942bp
MIIPKAMRAKVLQNLHTQHQGITKTRALAKQLYYWPGLSNAITQMVSNCQ
ECTRLLPSQQNEELVQSSSDRPFEAVSVDLFELRGQHYMVMIDRFSSWPC
VAQLRKLDSSSIIKFLDEWFIDFGIPERVRTDGGPQFRGAFNNYCQAMKI
NHELSSPYNPKSNGHAESGTFVEKDVATRDPQGQSGHHPGEWGERPRHGY
NLRERSRLQDQEGIIVVVVLQRKVHDGQPFGLGKHLGESNVRLAKLKIAY
HPIEDFIPILVSAPELAVRGQAHIELGLDGVGNGLDQVQLDTLLGDDLAL
GTFDLLEKRRVVDTTAQDDAATQVEMLPMVEKVTSTQDKSLAIPKVLECK
AKLQPQGGLVHVALSGDYQEIQKSEPSQQIISDPRDLIIQHQYQNGHLGL
GIVSEAIQGHNLGATIGKENTVLAVGGITITSLVLGKVKTGILVLDTVLV
LVLGGLLIRGLLVGGGPVGSIVGQDGGGEEEDGDEGLERVFITLAVLAVA
SAAPMADNPAPYQPAPYQPAPYKPASYKEPAYEEPAKYEYQYGVQDQYAG
VDFAQNEARDGYATNGEYRVALPDGRTQIVTYNVQDGYSGYVADVFITLA
VLAAVASAAPMADNPAPYQPAPYQPAPYKPASYKEPAYEEPAKYEYQYGV
QDQYAGLDFAQNEARDGYATNGEYRVLLPDGRTQIVTYTVQDGYSGYVFI
TLAVLAAVASAAPMADNPAPYQPAPYKPASYKEPAYEEPAKYEYQYGVQD
QYAGLDFAQNEARDGYATNGEYRVLLPDGRTQIVTYTVQDGYSGYVADVF
ITLAVLAAVASAAPMADNPAPYQPAPYQPAPYKPASYKEPAYEEPAKYEY
QYGVQDQYAGLDFAQNEARDGYATNGEYRVLLPDGRTQIVTYTVQDGYSG
YVADVRYEGEAKYAPYEPKAGYKPAPKYAPAPAYKPAPAYEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR000618Insect_cuticle
IPR015416Znf_H2C2_histone_UAS-bd
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0042302structural constituent of cuticle
GO:0003676nucleic acid binding
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