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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR002293 | Amino acid/polyamine transporter I | PFAM | PF13520 | AA_permease_2 | coord: 51..433 e-value: 1.4E-44 score: 152.5 |
IPR002293 | Amino acid/polyamine transporter I | PIRSF | PIRSF006060 | AA_transporter | coord: 30..440 e-value: 2.6E-90 score: 300.7 coord: 490..561 e-value: 0.015 score: 11.2 |
IPR029485 | Cationic amino acid transporter, C-terminal | PFAM | PF13906 | AA_permease_C | coord: 499..549 e-value: 7.9E-24 score: 83.4 |
None | No IPR available | GENE3D | 1.20.1740.10 | | coord: 46..447 e-value: 8.4E-118 score: 395.9 |
None | No IPR available | PANTHER | PTHR43243 | FAMILY NOT NAMED | coord: 489..552 |
None | No IPR available | PANTHER | PTHR43243:SF42 | SUBFAMILY NOT NAMED | coord: 30..448 |
None | No IPR available | PANTHER | PTHR43243 | FAMILY NOT NAMED | coord: 30..448 |
None | No IPR available | PANTHER | PTHR43243:SF42 | SUBFAMILY NOT NAMED | coord: 489..552 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 411..430 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 547..563 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 388..405 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 50..73 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 503..520 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 521..525 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 315..333 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 334..356 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 74..84 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 247..267 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 207..227 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 116..137 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 181..200 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 431..502 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 85..104 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 228..246 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 406..410 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 357..387 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..49 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 268..287 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 201..206 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 138..180 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 526..546 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 288..314 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 105..115 |
None | No IPR available | TMHMM | TMhelix | | coord: 386..403 |
None | No IPR available | TMHMM | TMhelix | | coord: 82..104 |
None | No IPR available | TMHMM | TMhelix | | coord: 245..267 |
None | No IPR available | TMHMM | TMhelix | | coord: 524..546 |
None | No IPR available | TMHMM | TMhelix | | coord: 116..138 |
None | No IPR available | TMHMM | TMhelix | | coord: 334..356 |
None | No IPR available | TMHMM | TMhelix | | coord: 288..310 |
None | No IPR available | TMHMM | TMhelix | | coord: 497..519 |
None | No IPR available | TMHMM | TMhelix | | coord: 179..201 |
None | No IPR available | TMHMM | TMhelix | | coord: 408..430 |
None | No IPR available | TMHMM | TMhelix | | coord: 50..72 |
None | No IPR available | TMHMM | TMhelix | | coord: 208..230 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03455 ID=Tk03455|Name=Tk03455|organism=Tigriopus kingsejongensis|type=polypeptide|length=563bp LPHFVMSSLFRMSDSDRDRLGPLKQGFCQRLARRKNIDPKEIGTSKLDRC LTTFDLTALGIGATLGVGIYVLSGSVAKDVAGPSIVVSFLIAGVASALSG LCYAELGARVPKAGSAYVYSYTTVGEFVAFIIGWNLILEYAIGTASVARA YSGYLDSLLNKSMQKFIQYYLPLNVPHLSPYPDLCAFSITMLLTVLLSLG VKESTRFNNVFTCLNVSIVIGVISLGVFNSDFHNWSLPSREIDAGGFFPF GFAGTLSGAATCFYGYVGFDAIATSGEEAKHPQTAIPLAILISLLCVFCA YFGISSVLTLMVPYYLQDADAPLPFAFHYVHWDFIGNLISIGALFGLSTS LMGAMFPLPRVLYAMASDGLIFRWLADIHPRYQTPLKATFSSGLFVGIVT SLFELKSLVDMMSIGTLMAYTIVSACVILLRYQDIPGLGSTLEYMPLDTL GDTDRLMSGGANRAFEDESSEEEEIVYCRSEDIDDLNLLQPKTSQVLSFK VPLVPYLPALSIFVNLYLMLKLSWGTWVRFAVWMSVGFLMYFIYGVRHSS EEYRMKGQKPPQN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
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