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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003593 | AAA+ ATPase domain | SMART | SM00382 | AAA_5 | coord: 364..550 e-value: 1.1E-17 score: 74.7 |
IPR036640 | ABC transporter type 1, transmembrane domain superfamily | GENE3D | 1.20.1560.10 | | coord: 1..325 e-value: 1.2E-70 score: 240.3 |
IPR036640 | ABC transporter type 1, transmembrane domain superfamily | SUPERFAMILY | 90123 | ABC transporter transmembrane region | coord: 1..319 |
IPR011527 | ABC transporter type 1, transmembrane domain | PFAM | PF00664 | ABC_membrane | coord: 12..292 e-value: 5.6E-42 score: 144.2 |
IPR011527 | ABC transporter type 1, transmembrane domain | PROSITE | PS50929 | ABC_TM1F | coord: 12..305 score: 47.756 |
IPR003439 | ABC transporter-like | PFAM | PF00005 | ABC_tran | coord: 356..504 e-value: 1.7E-33 score: 115.9 |
IPR003439 | ABC transporter-like | PROSITE | PS50893 | ABC_TRANSPORTER_2 | coord: 339..573 score: 22.696 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 330..577 e-value: 3.5E-90 score: 304.0 |
None | No IPR available | PANTHER | PTHR24221:SF394 | MULTIDRUG RESISTANCE-LIKE ATP-BINDING PROTEIN MDLB | coord: 6..576 |
None | No IPR available | PANTHER | PTHR24221 | FAMILY NOT NAMED | coord: 6..576 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 141..158 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 59..80 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 292..578 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 182..244 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..58 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 163..181 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 159..162 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 245..267 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 81..140 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 268..273 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 274..291 |
None | No IPR available | TMHMM | TMhelix | | coord: 245..267 |
None | No IPR available | TMHMM | TMhelix | | coord: 144..178 |
None | No IPR available | TMHMM | TMhelix | | coord: 59..81 |
IPR017871 | ABC transporter, conserved site | PROSITE | PS00211 | ABC_TRANSPORTER_1 | coord: 476..490 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 332..574 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03486 ID=Tk03486|Name=Tk03486|organism=Tigriopus kingsejongensis|type=polypeptide|length=578bp MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASF GFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAY EHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIA VGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSS RLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVI RMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTI DLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRA GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDG VDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQ QAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLD EATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGK IVEQGNHDTLLAAKGHYHSQWMVQTGGA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO:0042626 | ATPase activity, coupled to transmembrane movement of substances |
GO:0016887 | ATPase activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
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