Tk03657, Tk03657 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03657
Unique NameTk03657
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1648
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10coord: 855..1051
e-value: 2.1E-13
score: 52.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1575..1648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1602..1626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1629..1648
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 26..1078
NoneNo IPR availablePANTHERPTHR10796:SF182SUBFAMILY NOT NAMEDcoord: 26..1078
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 528..569
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1003..1013
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 946..965
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 411..501
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 914..934
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 371..384
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 594..887
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 888..908
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 935..945
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..410
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 351..370
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1401..1648
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1014..1037
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 966..984
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 985..1002
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1377..1400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 502..527
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 909..913
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1038..1376
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 570..593
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 852..1038
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 323..527
NoneNo IPR availableTMHMMTMhelixcoord: 503..525
NoneNo IPR availableTMHMMTMhelixcoord: 40..57
NoneNo IPR availableTMHMMTMhelixcoord: 575..597
NoneNo IPR availableTMHMMTMhelixcoord: 356..375
NoneNo IPR availableTMHMMTMhelixcoord: 1016..1038
NoneNo IPR availableTMHMMTMhelixcoord: 466..488
NoneNo IPR availableTMHMMTMhelixcoord: 1377..1399
NoneNo IPR availableTMHMMTMhelixcoord: 914..936
NoneNo IPR availableTMHMMTMhelixcoord: 385..407
NoneNo IPR availableTMHMMTMhelixcoord: 982..1001
NoneNo IPR availableTMHMMTMhelixcoord: 892..909
NoneNo IPR availableTMHMMTMhelixcoord: 940..962
IPR003392Protein patched/dispatchedPFAMPF02460Patchedcoord: 363..716
e-value: 3.4E-37
score: 127.9
coord: 881..1037
e-value: 5.0E-33
score: 114.1
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 355..527
score: 31.755

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold11_size778918-snap-gene-1.12-mRNA-1maker-scaffold11_size778918-snap-gene-1.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03657 ID=Tk03657|Name=Tk03657|organism=Tigriopus kingsejongensis|type=polypeptide|length=1648bp
MVLGCQAIPNGLQKASDAISKGLEDYFYRHGKWVASHPKLTILGALVGVA
LCGLGLFRFNEEKNMVKLWIPPNSDFAHNNQWLWENFPPDLSSVILEHEE
NILVPEVIQQMYQIHKNVLQLRTSGGQGWLDLCYKLPVVDVESSDLPSKP
VQKREAPSPNTEEDFFGDFGDESDDFAAIKSGAGVGKAFDPSVVFYPEQY
CPIVEAMPMACFEMSILEMFAQGGQFTPKVEATIHNLDQEELITAVNTIG
QSGIFLRERDFSKYLGGIQRNSTGHIVGAKATFIRWFGRANISEIQNEKG
RNGMDQQPVDVTTLEFEQLLQISLDDKCGYPEGLKSQANVQRSYGDISNG
AIWDDVIFLTCGYFMIYVYVQSMLGRFNRVEQRAFLGAMGITSSGLAILV
SMGLCSLMGLDYGPMHSLIPCLLLGLGVDDMFVIVQSFNNSEGEDKAKGI
IKDLPERIGQALKHAGVGITITSVTDIVVFAVGGTTTIDECRLQVLPSLR
SYSLYTATGIAATYVLQVTFFVAWLAIDQKRIDDKRDGACCWVVHGDQWK
PNKLSQRSLMEEAFDALGRFLAYPIVKISVLLTTLAFFALGCWGTTLLEV
EFRYVEFLPDDSSIYQWFQLHTGYFPGDGEMGTLYFSEMDLYKELPKIKN
LVDKFTNETDIIFSFDSWYPEFESYLNDYFLQPDEAIPDHPISEEFFNEK
LTQFLFSPIGAQHMNKFQFAEPIACGTDAPKVLVSTVVDVEFPICLSKLF
SPAYDLPWLNIWVNATLQIAKLLDVRRPQSLVKEGTCTLSVALGEHWRIN
HVHDRVIHKMTGKTCLLTFSCVDPYTTLYPPMSTMEFVHRKFNSSTQHIP
AMNWVKDSVVDAGFPGITFAMAQSYSRWEIDEVISQELFRNLFLAIICVS
ITTMLLIANTTSCIIVILCVVMSLVDVGGAMYFWGLTIDIVASTNIIISV
GLCVDFSAHVAHYFMLQSGSKNERMRSTLRKIGPAVFNGGISTLIAVLML
MNSKSHVFISYFKVFFLMIVFGLFHGLLFLPVVLSLLGSKPYKIADTSNE
KPPSYVIAHDAKMEINHNEEQDLVDIQKLLPGEIIEDDGFVFYFNAPELE
RGREEIKRLEVNAGRRKNGEELTAVKSTTADELSKETTKPTGKEVEAKRR
VVLKGPPLLKYEDIPEVPFESHELPLFEDLGLGPRDGGESDERGYFRGAK
FIPFDTLPTVQKDHGFVPMVRRIHSNTTTPDAYQCKECLVVGELAFDNLN
GTFDKITSRDFFFAVDGYMNDFVDTVISHPEDYVQLGDLHQVGSTIYLNF
TFTYGHVYTSAREERLQKVFNEYTTNSTALAQADLHILPEQSMLMVERNE
SLRWDPTNEIRPDPFGLMESGVENFHVHWIVDMIFLLLGFTSPIFVITGF
KHQRQKLRFKRYALKEAKRMEIYHQQRQRFNRSVINQRIGLYGHLKTRLE
PAKWVRVDIGAKRLVVGGQAVISGSGLDRKPIEFPNSIRDTETELMAEKV
KKMELAPQCPSLKKVDHQDIPRLRRLRDIRNNQVMPQRKDSAQRDQSTLD
LTKNDQNKTKKADQCNQTILAEQSKAKRDASEVKKANRCEQTILSDPSTS
TKDQVEVKKADPPVVTKDRAETEVAHRSDTTVCAATKTPKGSNKADQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003392Ptc/Disp
IPR000731SSD
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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