Tk03821, Tk03821 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03821
Unique NameTk03821
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length420
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 321..330
score: 79.45
coord: 311..321
score: 70.25
coord: 296..307
score: 37.37
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 274..336
e-value: 2.5E-24
score: 96.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 275..331
e-value: 1.4E-20
score: 72.8
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 272..332
score: 20.73
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 275..333
e-value: 1.12944E-13
score: 63.0312
NoneNo IPR availableGENE3D1.10.10.60coord: 244..335
e-value: 2.3E-26
score: 93.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..240
NoneNo IPR availablePANTHERPTHR24340:SF37HOMEOBOX PROTEIN SLOUcoord: 106..383
NoneNo IPR availablePANTHERPTHR24340FAMILY NOT NAMEDcoord: 106..383
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 307..330
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 266..333

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold278_size225338-snap-gene-1.21-mRNA-1maker-scaffold278_size225338-snap-gene-1.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03821 ID=Tk03821|Name=Tk03821|organism=Tigriopus kingsejongensis|type=polypeptide|length=420bp
MNDVSMREQHDPLGFHSLFSMAEKQRHSRMSSGPNERDSDEEAGAEANNL
RVPVFKLKSHQDFVSDSRSESDLSTDKNKNVKGWNTSGGDTLKAEITDDQ
EPPDEEEQICVDDQGGEDDHGQSPKPSSTPPSRISFSVDNILAPDRFKPT
TAAAAFSTVHHQMLLMNAAAAAAHQALMRQQHEVEHIRRLQGQGMKSEGM
ELSPPDDHKSSRDPSQAQRNLLEATDEDDLEDEDNDSDGQSCTDSMDFAN
DTSMSAARARKKKASESGSKAAKPRRARTAFTYEQLVSLENKFKTTRYLS
VCERLNLALTLNLTETQVKIWFQNRRTKWKKQNPGMDVNCGTLPSPPTSL
CPSYPSLFPPSPSDLGFFSAPPFPFLGSSSGGPMSSPSGGVPHTLASLLM
HQHQQQAVAVAMSEANSVSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020479Homeobox_metazoa
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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