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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1486..1506 |
| None | No IPR available | COILS | Coil | Coil | coord: 1264..1319 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2092..2111 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2051..2134 |
| None | No IPR available | PANTHER | PTHR14222:SF1 | CONDENSIN-2 COMPLEX SUBUNIT D3 | coord: 30..1440 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 61..80 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..37 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 103..2134 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 38..60 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 81..102 |
| None | No IPR available | TMHMM | TMhelix | | coord: 81..103 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 464..680
e-value: 1.3E-7
score: 32.6 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 950..1083
e-value: 4.3E-8
score: 35.0 |
| IPR032682 | Condensin complex subunit 1, C-terminal | PFAM | PF12717 | Cnd1 | coord: 992..1162
e-value: 9.0E-19
score: 67.9 |
| IPR026971 | Condensin subunit 1/Condensin-2 complex subunit D3 | PANTHER | PTHR14222 | CONDENSIN | coord: 30..1440 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 879..907
coord: 951..1281
coord: 708..815
coord: 469..674
coord: 291..388 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk03824 ID=Tk03824|Name=Tk03824|organism=Tigriopus kingsejongensis|type=polypeptide|length=2134bp
MTVLVKQLVKVVPGPEVSSADLTSLSLSSSARATSSGFWPTLMELGINYR
ALIGLLFHFMEAGQRFEADQSERKLCIRATSLYLVLLALPGSGAFKIFHP
VLYQRALSTFKLATKLRLAKFSPKKKNRKAPPKGASQRPRGRWGRSNSIT
SNQLYDEDFDLSDDDESHGLSEAEVSELANALNGVIYDFHVFLDHHPLKR
SLESLELTVSELVELTHLETTIANLDFGHKNRRSDLSALAFNAYCALERI
CHPLHGDVKRSLLLIFKFLLPAILMTHRGSSEITPKGLTIIREHSLHFVK
HLVRRMGEETHSPLEVLVQHMALQVPDKAEFRSKTSHAIVSLMRELPSGQ
VFNRMVRWFFAWAHSEKVAHRQFSLEVMGRLIQENERGQEPVGASPEKVP
ILTPDAAQEPSETLDAAKEPPKTLDIETGLISENIVHPLPEASQEIRVTE
PSEATVSSQTVKKRSYLGDLVSHKFIFGVIFSRCRDVSATVRAKALQTLA
DITAANNPIIVTVIQSMMDQSAQIGSQPNAALENMVDFVELLEDESKDLG
AINPLPSAACFTEFLRKRALDESVYVRKNSIQVIVNILKFSADLLQEDLV
SILSEHCRDSSLMVRKLISGALTDLLKTYPTNDMVIRHWVDGLFPLILDV
EQKAAEKVLESVWECLFGNLVKYSASGKNVHFLPWKILQSSEELKMTKYL
SRACGIWAKEGQLKANVIDILKTHIHTENNDLTWLILSLISGHVTIPDPH
FVMEYFNTSIHTPEGVGLYTLLQVLRVLFASVIRLSQNEQTMLQKDLVLL
VKRFAIPPELIPTAVDIATVVSSIEAGGGSDSSSLKAYQTKVDGWTVEII
EAIDHDLSEKILNPSGEDVEDVQMMRKIFTLGELAQISPQKINKRLFLLM
QSIIFQQGTKHRRPKKGVGTQSDGQSQSQAPVAVPSSQTQSSQPPPCAFQ
PTTRLQALAIVTLAKMCLQHEDMAKKIIPAFGQILDTSNDNAVKNNIMYA
LTDMCVRYASLVDPLIPQITACLKDDSLVVRRSTLITLIHLLQEDYLKMS
GRGAFFFRIMQTLNDDSDEMRHLTTFYLQQRLIKRKPKVMFQHFTEALFH
FNEYESHETYNKFNISEREKRLFSMRGPEYRHDRMKLYKFMLENMSDEQR
FQTTYRLCKDILGGAVEGQVILGLESFDLLQDAFACLSCEEIKLASLKSK
VDEDEGQPSSQTDDDMSGAIQSALKKNLISQVVKKNVIENIIPIIISLKH
KLEELESGLLDDLMNYLRELMKDYKNEVKDMLAADKQLATEIESDLKKWE
EEQKKIEEARREAEAQDKSPSRRDLLLRAVVESAVNVFQEKQKEKERRKE
AGEIIDDDSISSQGDLMDKFLTKNVGKPGSNPANISTMLSPRLVIQDVMS
PLQASSSKSMREKSSASPRSVSRNSGERSPTTAKRKLTESFNDMVVAEES
ILMTEADQENLASEVLSELHAHQKSSANLTTTVPSLAEINRELEVAVNKS
KRLQRKTPKGRVSVSDKENITDDESQTLASALEDSICEAEPSPSLEPLEQ
ELEAIAPDSPAKDPISSQSPIPPESVVCEPLPETRQGRKRKLTDLPGAEA
SPSQPTQKKAQSKASQDSRGIKESEGLLPPSEVTNPEAIAAPVLSEATAP
PEAEEEAPPPASDKKEADSLVAQENDAPSEADALLPSPETKDTDAEETKE
SKPDEATETSERSRPSLGGSTDDAVPEPRDEAKSKAPLAKSKPMAKRKTR
KGRSRTIATQSGRGPVVLIEPLGKRWKYKGIAATIPRARPASPKPSHQPP
VAASPQVGTKRRSARSTAEVEEVESSPPKRRRIMSPKLQKSPAKSRVTSK
MASRLSLVVKAVEMETANTPERSYGGISRLQKEIKPSRNDEVHQVGNKKK
KKRALPLLKPRKRTRGQNQRATTSSEDEEVSFNFQPQPPAEKDPEDEISF
KLPDPGIVPSRSILSNAAFRSSRSKEVSFKAPSLNEISSASLTTRRFQLS
HKAQEKRRSLASMASEVDPLRSKAQNVLRAISTPKAKGVSQGDLTFLEQS
HDLSAIPILSPPSTRKKRGTKPQSDPTDESAVSFKFGRTRQDPFVEMLKR
DENHRRASNEEAGQDTSLSRVSPRSRKPNKRYLN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007076 | mitotic chromosome condensation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
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