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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003663 | Sugar/inositol transporter | PRINTS | PR00171 | SUGRTRNSPORT | coord: 210..229 score: 39.58 coord: 91..101 score: 39.32 coord: 369..379 score: 57.2 coord: 481..493 score: 32.18 coord: 458..479 score: 32.05 |
IPR003663 | Sugar/inositol transporter | TIGRFAM | TIGR00879 | TIGR00879 | coord: 78..552 e-value: 1.8E-104 score: 348.1 |
None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 69..557 e-value: 7.3E-126 score: 422.6 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..41 |
None | No IPR available | PANTHER | PTHR23503 | FAMILY NOT NAMED | coord: 74..557 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 359..386 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 453..479 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 295..358 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 513..517 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 398..417 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 238..261 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 173..183 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 232..237 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..150 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 273..294 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 540..557 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 448..452 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 518..539 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 424..447 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 184..203 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 209..231 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 480..490 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 151..172 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 387..397 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 262..272 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 418..423 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 204..208 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 491..512 |
None | No IPR available | TMHMM | TMhelix | | coord: 210..232 |
None | No IPR available | TMHMM | TMhelix | | coord: 517..539 |
None | No IPR available | TMHMM | TMhelix | | coord: 239..261 |
None | No IPR available | TMHMM | TMhelix | | coord: 271..293 |
None | No IPR available | TMHMM | TMhelix | | coord: 491..513 |
None | No IPR available | TMHMM | TMhelix | | coord: 358..380 |
None | No IPR available | TMHMM | TMhelix | | coord: 456..478 |
None | No IPR available | TMHMM | TMhelix | | coord: 181..200 |
None | No IPR available | TMHMM | TMhelix | | coord: 424..446 |
None | No IPR available | TMHMM | TMhelix | | coord: 152..174 |
None | No IPR available | TMHMM | TMhelix | | coord: 395..417 |
IPR005828 | Major facilitator, sugar transporter-like | PFAM | PF00083 | Sugar_tr | coord: 86..556 e-value: 1.6E-120 score: 402.9 |
IPR005829 | Sugar transporter, conserved site | PROSITE | PS00216 | SUGAR_TRANSPORT_1 | coord: 413..429 |
IPR005829 | Sugar transporter, conserved site | PROSITE | PS00217 | SUGAR_TRANSPORT_2 | coord: 215..240 |
IPR020846 | Major facilitator superfamily domain | PROSITE | PS50850 | MFS | coord: 83..545 score: 38.962 |
IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 153..539 e-value: 1.16449E-19 score: 88.1397 |
IPR036259 | MFS transporter superfamily | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 152..552 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk04031 ID=Tk04031|Name=Tk04031|organism=Tigriopus kingsejongensis|type=polypeptide|length=557bp MSEADRKSNQDDPEASDGLLADTKPPVIRKASNEPAPAGKSAVKCLKRQL MKLRDQIYKDTTAPMALEGSGQGGLNARLAFAITAGAFGSAFQHGYNTGV LNAPQALIMAWIQKCNDPNETLPVSPPPFAITDGAPAESLCQMSETEVTL IWAWIVAVFCVGGMIGGSIVGVVAGKFGRKGGLLLNNVLVLLAGVCMISA KYLNSYEMIILGRLLIGINSGLNAGLAPMYLSEISPTAFRGAVGTVYQLI ITISILLSQILGMKNILGNEAGWPWLLGLTVIPGLIQVIILPFCPESPKF LLLDRDDQERSNSALVWLRGKVDVHDEMDEMRTEQESMKLVPKITLLEMV KNSALRQPLIIAMMMMLAQQLSGINAAMFFSTSIFMSAGLDEAASQSATL GMGGMNVAMTVLSLIMIEKAGRKTLMITGLVIMCLTTTCLLICLAAVKTV PWLSYVAIVMVIGFVVGFATGPGSIPWFFVTELFNQSGRPIATSIAVATN WAANFLVGLGFAPIHLAVGPYVFIIFIIVQVFFIVYVWFKVPETKNKTIE EITAQFR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
GO:0005215 | transporter activity |
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