Tk04266, Tk04266 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04266
Unique NameTk04266
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1215
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.1880coord: 449..521
e-value: 1.3E-12
score: 49.7
coord: 688..758
e-value: 2.0E-10
score: 42.7
coord: 608..682
e-value: 2.4E-13
score: 52.1
coord: 524..598
e-value: 3.2E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1194..1215
NoneNo IPR availablePANTHERPTHR14379:SF3MEIOSIS ARREST FEMALE PROTEIN 1coord: 123..741
NoneNo IPR availableCDDcd08824LOTUScoord: 689..755
e-value: 4.10676E-7
score: 46.0729
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 130..206
e-value: 1.8E-15
score: 59.0
IPR025605OST-HTH/LOTUS domainPFAMPF12872OST-HTHcoord: 612..678
e-value: 7.7E-13
score: 48.1
coord: 530..585
e-value: 1.1E-4
score: 21.9
coord: 695..756
e-value: 7.9E-7
score: 28.8
coord: 871..934
e-value: 8.9E-6
score: 25.4
coord: 452..518
e-value: 2.4E-10
score: 40.1
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 611..685
score: 17.087
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 451..525
score: 16.627
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 527..601
score: 14.242
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 767..849
score: 7.166
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 688..764
score: 14.235
IPR025605OST-HTH/LOTUS domainPROSITEPS51644HTH_OSTcoord: 863..939
score: 11.153
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 133..202
e-value: 5.4E-5
score: 22.8
IPR024768Meiosis regulator and mRNA stability factor 1PANTHERPTHR14379LIMKAIN B LKAPcoord: 123..741
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 112..211

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1103_size62544-snap-gene-0.13-mRNA-1maker-scaffold1103_size62544-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04266 ID=Tk04266|Name=Tk04266|organism=Tigriopus kingsejongensis|type=polypeptide|length=1215bp
LSLLHHTTCPAMNSRAKDVFFPDRSLSSISTESDGLASPTSPHDLLPPLA
ALFDPLGPMGGVESSGGSAHDEALRRLRQPRRLPAELDYSEGGAAAHLLE
DHIRQNYLAYPSRHHPEEESLSSPNVPPSPVELMVTNLDQAIEQREIKAI
LQSLFEPFKARQINVFTQSDGNTSASVKMASLEDAQLAISRLHRSKVGSK
RILINYNNVNVANPAILRKKVMSILKEVPEGRLQLFKFRDMYEKRYAGSI
GVSDLYKIKDVVSITEEVSGRIVSLNAYAKFSTDENNLESRCPTHAPSND
EEGWAEKEAGTQLPSVNIALSVLGPNLKQVLKDHKGSAPLYTIMHCYNAN
LNFEPLTEDTIDGVPLEHLISAVKGLQIVSTSSGVKSIVIVSGDEELSNA
SMSGHGLIASYGVNSGSTSSHMGILPPGPGHLGFQGPPSANSLGHLTLTN
QLNQLSRYLVDLLKAQQGTRILFQRFIPAYHHQFGTQLRVADYGYTKLKD
LLEALPNVIQIIGEGSKSVITLTHRHQVKRFQSDLLKILKGLPNKQVALS
EFPKIYEKTFKREFRVTDYGVCDIDDLLHEISETSVAVSKSGDDILIEVP
KREQTLDELERTQTFAEECKKLLRHAPECRIPFNKFIPSYHHHFGRQCRV
SDYGFSKLMELFESIPQMVDITEDPDGERLIQLTDSVRLSVVGDQIKDLI
LITQDKCLTVEEMEANYKSNFGYQLRPDTFGYNSMMELLKTMNQVIRLED
PEDKKDSVRIRLIDRSYIKSLSKNVRSILTLQQDGQMAIEEFLKEYERRF
HKMLDLKKLADDLPDLVEVLDENSNKKPTKATKEDGNNNNNGETLKLAET
GDPQVGAPTKSIRLVPLQLCVARITELIKEHDKLYCSDLEALFAEKYKTP
LSPGQYGYPNIKNLLESGLAKYFTIRGRGPRKVICIAKDTPERPSTDYSA
AHQSSKRDFDHGSTNLAGPHRGFSSSSSLDHSSAHLHGSRPGSLSGQGDT
TSFPRQSYPPAGSSPGAAAAHNVNYSSHYNMDLLRLARPRHPLPSYPGTS
APAEPLFPFPPPHGGRSSSSGFYQLGAGARDHPFYGSMSREAAAAAAAAY
YRDDYVMHAAAAAMYRAELAAAAAAYSPHAPPRGYMNDLAKYNIFPGGGS
NPRDDLTQNLSVSSYGEVVPPNSPSDSVHSAEIRHAAAAAISQLNSNNNN
NLQGKTAGEASEFYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR025605OST-HTH/LOTUS_dom
IPR000504RRM_dom
IPR024768Marf1
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
Vocabulary: Biological Process
TermDefinition
GO:0010468regulation of gene expression
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