Tk04297, Tk04297 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04297
Unique NameTk04297
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length822
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 653..822
e-value: 2.0E-15
score: 67.3
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 650..788
e-value: 1.4E-10
score: 41.5
IPR003265HhH-GPD domainCDDcd00056ENDO3ccoord: 646..821
e-value: 3.61257E-28
score: 108.868
NoneNo IPR availableGENE3D1.10.340.30coord: 643..769
e-value: 1.6E-78
score: 264.8
NoneNo IPR availableGENE3D3.30.310.40coord: 526..607
e-value: 3.1E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR10242:SF2N-GLYCOSYLASE/DNA LYASEcoord: 524..822
NoneNo IPR availablePANTHERPTHR10242N-GLYCOSYLASE/DNA LYASEcoord: 524..822
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 530..642
IPR025164Putative adhesinPFAMPF13349DUF4097coord: 354..470
e-value: 2.0E-8
score: 33.8
IPR0129048-oxoguanine DNA glycosylase, N-terminalPFAMPF07934OGG_Ncoord: 536..648
e-value: 1.8E-32
score: 111.8
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 773..822
e-value: 1.6E-78
score: 264.8
coord: 616..631
e-value: 1.6E-78
score: 264.8
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 643..821

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold722_size106786-snap-gene-0.33-mRNA-1maker-scaffold722_size106786-snap-gene-0.33-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04297 ID=Tk04297|Name=Tk04297|organism=Tigriopus kingsejongensis|type=polypeptide|length=822bp
MSSSLLLRHVHSSLNRSRAPGHQPRPATLLGLVQRSRFHGQCGPHRVPRG
SGPRSPSFGYHRSSPVLLDKFVKHVKYEASLVVKAPFHIKVKGSHFDHDP
AQLKTASSDVSETDPRTELPSILKKLMHQRQIGDKERDILNQLTEDIRVE
YESQLNEFRRMDPHFSKKTQLHFLLNGRKVHRVDSYSILSSKSQHSHVYV
TDATNFEEAQAMIARLESGNKFESCGSISIWQPKYPGGSSGSDMEPGSGI
SSNAEVVGGLKLYIPHHVLETFDNGLKGVFLVPTLMDRIYLQSKNEGSVE
LDGQLINELVSVGIYTEAGHIRVKELCSCEVKLASRFGDIVSEGTLEGHV
VVETYGQGAFRAKYIEGPTLTVTTESGDVLVSGDCNSNSSQFFTQTGNIT
LKHLYNSNCILIREKGELSLNLVQGEITGIVKKGNIHATLESITGSSSLQ
AMDGDITLTIPEKHSFRICATAITSNIAPKILNTGELFLSEKSAHQKFTS
GSLLSGKDEDYPLLTISVPNDMSQDEVFAKMSWTRIPCCKSELRLDIVLK
CGQSFRWKNSSENSDHWIGVLKGRVWLLSQDDSHLMYKTFPKAESPSDLD
GAIQDYFQLKVDLAPLYEMWAEHDPVFKEIATSFSGVRMLRQDPVENLFA
FICSSNNNIQRISSMVENLCLHYGTRVLDHEELAFHSFPTVAQLARNSGQ
VEKKLRSLGFGYRAGYIAKSAKQIADKGGEEYLMSLRSLPYAKAREELLQ
LAGIGPKVADCVLLMSLDQPSAIPVDTHMFQIAATKYLPHLKGYKSVTDK
VYKEIADHFRSLYGDYAGWAHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003265HhH-GPD_domain
IPR025164DUF4097
IPR012904OGG_N
IPR023170HTH_base_excis_C
IPR011257DNA_glycosylase
Vocabulary: Biological Process
TermDefinition
GO:0006284base-excision repair
GO:0006289nucleotide-excision repair
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003824catalytic activity
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