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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 105..139 |
None | No IPR available | COILS | Coil | Coil | coord: 148..168 |
None | No IPR available | COILS | Coil | Coil | coord: 77..97 |
None | No IPR available | COILS | Coil | Coil | coord: 481..501 |
None | No IPR available | GENE3D | 3.40.30.10 | | coord: 236..340 e-value: 7.6E-24 score: 85.9 |
None | No IPR available | GENE3D | 3.40.50.170 | | coord: 428..625 e-value: 4.1E-68 score: 230.9 |
None | No IPR available | GENE3D | 3.30.1020.10 | | coord: 341..400 e-value: 6.7E-24 score: 85.5 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 18..28 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..17 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 34..636 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..33 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 29..33 |
None | No IPR available | CDD | cd08648 | FMT_core_Formyl-FH4-Hydrolase_C | coord: 428..623 e-value: 6.58579E-114 score: 336.842 |
IPR004810 | Formyltetrahydrofolate deformylase | PRINTS | PR01575 | FFH4HYDRLASE | coord: 429..451 score: 45.41 coord: 451..478 score: 40.08 coord: 575..597 score: 43.72 coord: 597..622 score: 47.22 |
IPR004810 | Formyltetrahydrofolate deformylase | TIGRFAM | TIGR00655 | TIGR00655 | coord: 400..623 e-value: 7.2E-86 score: 286.2 |
IPR004810 | Formyltetrahydrofolate deformylase | PANTHER | PTHR42706 | FAMILY NOT NAMED | coord: 397..623 |
IPR004810 | Formyltetrahydrofolate deformylase | HAMAP | MF_01927 | PurU | coord: 298..623 score: 40.242 |
IPR007157 | PspA/IM30 | PFAM | PF04012 | PspA_IM30 | coord: 62..183 e-value: 6.5E-16 score: 58.5 |
IPR019479 | Peroxiredoxin, C-terminal | PFAM | PF10417 | 1-cysPrx_C | coord: 351..387 e-value: 1.6E-15 score: 56.6 |
IPR002376 | Formyl transferase, N-terminal | PFAM | PF00551 | Formyl_trans_N | coord: 428..605 e-value: 5.4E-39 score: 133.7 |
IPR008024 | YiaAB two helix | PFAM | PF05360 | YiaAB | coord: 1..38 e-value: 4.9E-7 score: 29.8 |
IPR000866 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | PFAM | PF00578 | AhpC-TSA | coord: 250..329 e-value: 4.8E-12 score: 45.8 |
IPR013766 | Thioredoxin domain | PROSITE | PS51352 | THIOREDOXIN_2 | coord: 173..354 score: 9.067 |
IPR036477 | Formyl transferase, N-terminal domain superfamily | SUPERFAMILY | 53328 | Formyltransferase | coord: 428..624 |
IPR036249 | Thioredoxin-like superfamily | SUPERFAMILY | 52833 | Thioredoxin-like | coord: 250..393 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk04918 ID=Tk04918|Name=Tk04918|organism=Tigriopus kingsejongensis|type=polypeptide|length=636bp MALGIINIEADFMTRSYLGLASVFIISATFTLAKTVRDVHEDSRLQNKIS EAKTNKILSEFADQHDTLQAVVDSQAIRILEQEIRDCQASVAKAKVEMTK IVVERNGCERELGQLGQQLERLEERALQALQQGDEAMAEHLAQQMADIEL ASSEQRQHQQNMQSMESRLRDNLLRADRQIKQYLSGLSSDGSDEYKEKGN TYIGDIDLSSHKVTADWFPYEQSQFFVTAGLGYVNTDLKMKNKSGSGYTL AGEFAKRNTKPLGLSTDTVGEHMKWIADVNETQNTDLQFPIVADADLQVA QTYGMIHPNESVTAAVRSVFIIDPSNKIRLTLTYPMNVGRNFDEILRVID ALQLADAHKVATPADWQPGDKVIIPPSISNEQAKDIFPQGWNEIPETGKS LDELQAGFEAIAGEFEMEWGIRASEERMKVLLMVSNFGHCLNDLLYRWRI GALPIDIVGVVSNHLTYQKLVVNHDIPFHHIKVTKENKAEAEAKLMGIVE EADADLVVLARYMQILSDQLCQKMSGRIINIHHSFLPSFKGANPYKQAYE RGVKLIGATAHYVTADLDEGPIIEQDTIRVTHAQSSADYVSLGRDVEAQV LARAVHAHIHDRSFLNASKTVVFPAGPGAYASERMG back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0008864 | formyltetrahydrofolate deformylase activity |
GO:0051920 | peroxiredoxin activity |
GO:0016742 | hydroxymethyl-, formyl- and related transferase activity |
GO:0016209 | antioxidant activity |
GO:0016491 | oxidoreductase activity |
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