Tk04939, Tk04939 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04939
Unique NameTk04939
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length361
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableGENE3D3.30.160.20coord: 225..283
e-value: 1.2E-32
score: 113.3
NoneNo IPR availableGENE3D3.30.70.1660coord: 284..361
e-value: 1.2E-14
score: 56.2
NoneNo IPR availableGENE3D3.30.70.1660coord: 110..224
e-value: 1.6E-44
score: 153.2
NoneNo IPR availableGENE3D1.20.58.410coord: 5..96
e-value: 1.4E-5
score: 26.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..304
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 3..360
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 3..360
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 12..354
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 67..180
e-value: 9.5E-61
score: 217.8
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 13..205
e-value: 6.9E-69
score: 231.5
IPR004373Peptide chain release factor 1TIGRFAMTIGR00019TIGR00019coord: 3..360
e-value: 2.2E-159
score: 528.1
IPR004373Peptide chain release factor 1HAMAPMF_00093Rel_fac_1coord: 5..359
score: 40.415
IPR000352Peptide chain release factor class I/class IIPFAMPF00472RF-1coord: 215..323
e-value: 1.2E-41
score: 141.2
IPR000352Peptide chain release factor class I/class IIPROSITEPS00745RF_PROK_Icoord: 230..246

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-28.19-mRNA-1snap_masked-scaffold1_size3401120-processed-gene-28.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04939 ID=Tk04939|Name=Tk04939|organism=Tigriopus kingsejongensis|type=polypeptide|length=361bp
MTPSIERKLQALVERHDEVGILLGEPDTLADQNNFRTLSKEYSQLEPISV
NFNAYTAAQGDLAAAREMAEDSDPDMREMAQAEIGDAQKRIEQLEADLQI
LLLPRDPRDANNVFLEVRAGTGGDEAAIFAGDLLKMYGRYAENRGWRMEM
VSATEGEHGGFRQAVGRVIGDGAYSRLKFESGAHRVQRVPETESQGRVHT
SAATVAILPEIEAVEEIHINPADLSIDTFRASGAGGQHVNKTDSAIRITH
NPSGLVVECQDQRSQHKNRAAAMSLLQSRLMNIEVSKQQDEESESRRLQV
GSGDRSERIRTYNFPQGRVTDHRVNLTLYKLDEIMAGSLDSVIDPLLSEH
QADLMAELSKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR004373PrfA
IPR000352Pep_chain_release_fac_I_II
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016149translation release factor activity, codon specific
GO:0003747translation release factor activity
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