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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 77..97 |
None | No IPR available | GENE3D | 3.30.160.20 | | coord: 225..283 e-value: 1.2E-32 score: 113.3 |
None | No IPR available | GENE3D | 3.30.70.1660 | | coord: 284..361 e-value: 1.2E-14 score: 56.2 |
None | No IPR available | GENE3D | 3.30.70.1660 | | coord: 110..224 e-value: 1.6E-44 score: 153.2 |
None | No IPR available | GENE3D | 1.20.58.410 | | coord: 5..96 e-value: 1.4E-5 score: 26.8 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 285..307 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 285..304 |
None | No IPR available | PANTHER | PTHR43804 | FAMILY NOT NAMED | coord: 3..360 |
None | No IPR available | PANTHER | PTHR43804:SF4 | PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC | coord: 3..360 |
None | No IPR available | SUPERFAMILY | 75620 | Release factor | coord: 12..354 |
IPR005139 | Peptide chain release factor | SMART | SM00937 | PCRF_a_2 | coord: 67..180 e-value: 9.5E-61 score: 217.8 |
IPR005139 | Peptide chain release factor | PFAM | PF03462 | PCRF | coord: 13..205 e-value: 6.9E-69 score: 231.5 |
IPR004373 | Peptide chain release factor 1 | TIGRFAM | TIGR00019 | TIGR00019 | coord: 3..360 e-value: 2.2E-159 score: 528.1 |
IPR004373 | Peptide chain release factor 1 | HAMAP | MF_00093 | Rel_fac_1 | coord: 5..359 score: 40.415 |
IPR000352 | Peptide chain release factor class I/class II | PFAM | PF00472 | RF-1 | coord: 215..323 e-value: 1.2E-41 score: 141.2 |
IPR000352 | Peptide chain release factor class I/class II | PROSITE | PS00745 | RF_PROK_I | coord: 230..246 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk04939 ID=Tk04939|Name=Tk04939|organism=Tigriopus kingsejongensis|type=polypeptide|length=361bp MTPSIERKLQALVERHDEVGILLGEPDTLADQNNFRTLSKEYSQLEPISV NFNAYTAAQGDLAAAREMAEDSDPDMREMAQAEIGDAQKRIEQLEADLQI LLLPRDPRDANNVFLEVRAGTGGDEAAIFAGDLLKMYGRYAENRGWRMEM VSATEGEHGGFRQAVGRVIGDGAYSRLKFESGAHRVQRVPETESQGRVHT SAATVAILPEIEAVEEIHINPADLSIDTFRASGAGGQHVNKTDSAIRITH NPSGLVVECQDQRSQHKNRAAAMSLLQSRLMNIEVSKQQDEESESRRLQV GSGDRSERIRTYNFPQGRVTDHRVNLTLYKLDEIMAGSLDSVIDPLLSEH QADLMAELSKQ back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0006415 | translational termination |
Vocabulary: Cellular Component
Term | Definition |
GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
Term | Definition |
GO:0016149 | translation release factor activity, codon specific |
GO:0003747 | translation release factor activity |
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