Tk05239, Tk05239 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05239
Unique NameTk05239
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length670
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 258..339
e-value: 8.4E-29
score: 111.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 231..339
e-value: 5.1E-25
score: 87.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 218..383
score: 18.944
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 218..347
e-value: 2.0919E-37
score: 133.517
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 19..222
e-value: 3.3E-50
score: 182.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 31..207
score: 30.755
NoneNo IPR availableGENE3D3.40.50.300coord: 212..321
e-value: 6.8E-13
score: 50.8
NoneNo IPR availableGENE3D1.20.1090.10coord: 469..669
e-value: 1.5E-32
score: 114.8
NoneNo IPR availableGENE3D3.40.50.1970coord: 331..468
e-value: 5.7E-37
score: 128.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..209
e-value: 1.7E-69
score: 235.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..358
NoneNo IPR availablePANTHERPTHR24031:SF279SUBFAMILY NOT NAMEDcoord: 1..358
NoneNo IPR availableCDDcd00268DEADccoord: 3..208
e-value: 4.03642E-78
score: 245.472
NoneNo IPR availableSUPERFAMILY56796Dehydroquinate synthase-likecoord: 346..668
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 24..194
e-value: 2.3E-46
score: 157.7
IPR001670Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldAPFAMPF00465Fe-ADHcoord: 340..648
e-value: 2.2E-71
score: 240.5
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 153..161
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 1..28
score: 7.603
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 75..350

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold113_size352875-snap-gene-2.25-mRNA-1maker-scaffold113_size352875-snap-gene-2.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05239 ID=Tk05239|Name=Tk05239|organism=Tigriopus kingsejongensis|type=polypeptide|length=670bp
MTFSALNLTPAVLNALPNRLSSPTKIQLQAIPAALAGNDLLAMAQTGSGK
TLAFGLPLLQQIEKHPYAEKDNSSIQGVVLVPTRELAAQVTQALQEIATP
MGINIVMLCGGIEPDAQIAELDAAPQLLVATPGRLLDFINQNLVTLKNVK
HLVLDEADRLLEMGFWPDVQRIIAAMPAKRQTLLFSATLPAELESAAMAL
LFKPVRIEAHQKNSVVEDIEERLYLVNKGSKAQALIALIKQHEWQQVLVF
VSERNAADTLAKKLIKADVSVAALHGDKDQAARESTLADFKAGKITVLVS
TDLLSRGIHIDALPVVINADLPPNAPVYIHRVGRTARAGENGLALSLVCH
GVEPNPTKETLDKAVAIAKQENIDFILAVGGGSVVDGSKYVAAAANYAGD
GWDILTGQYTIETALPIGAILTLPATGSESNPAAVITKAETQDKLPFMHP
SVHPQFAVLDPDVMKTLPERQLVNGIADAWVHTCEQYITRPTGAMVQDGY
AETLLRTLKTLGEQFDDRDNDAWRENLMWSANQALFGLIGCGVIHDWATH
MIGHEFTALWHVDHARSLTIVQPSLLRNQIEYKRAKLEQMGRNVFGFSDS
DDLAERTIDAIEAFYSKLGLETQFTAHGTDKETAINAVIEQLAKHGMTAL
GENQAITLEKSREILENAIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001670ADH_Fe/GldA
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0016491oxidoreductase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
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