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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 973..973 |
None | No IPR available | GENE3D | 3.30.499.20 | | coord: 99..447 e-value: 1.6E-158 score: 528.7 |
None | No IPR available | GENE3D | 1.10.1440.20 | | coord: 672..732 e-value: 1.0E-20 score: 75.4 |
None | No IPR available | PANTHER | PTHR11670:SF1 | ACONITATE HYDRATASE | coord: 106..971 |
None | No IPR available | CDD | cd01586 | AcnA_IRP | coord: 159..645 e-value: 0.0 score: 733.725 |
None | No IPR available | CDD | cd01580 | AcnA_IRP_Swivel | coord: 749..919 e-value: 1.03489E-111 score: 339.252 |
None | No IPR available | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 713..969 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 277..290 score: 58.16 coord: 244..252 score: 39.68 coord: 220..233 score: 35.28 coord: 353..366 score: 55.69 coord: 367..380 score: 50.15 coord: 447..461 score: 40.54 coord: 291..306 score: 54.85 coord: 512..523 score: 59.35 coord: 574..587 score: 57.73 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 140..643 e-value: 1.6E-182 score: 607.5 |
IPR016092 | FeS cluster insertion protein | TIGRFAM | TIGR00049 | TIGR00049 | coord: 3..102 e-value: 2.1E-28 score: 96.6 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 106..970 e-value: 0.0 score: 1368.5 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | PANTHER | PTHR11670 | ACONITASE | coord: 106..971 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 448..671 e-value: 3.8E-98 score: 329.0 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 735..972 e-value: 1.7E-103 score: 346.8 |
IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain | PFAM | PF00694 | Aconitase_C | coord: 773..900 e-value: 6.6E-48 score: 162.3 |
IPR000361 | FeS cluster biogenesis | PFAM | PF01521 | Fe-S_biosyn | coord: 1..101 e-value: 2.5E-17 score: 63.0 |
IPR035903 | HesB-like domain superfamily | GENE3D | 2.60.300.12 | | coord: 2..98 e-value: 1.2E-28 score: 101.3 |
IPR035903 | HesB-like domain superfamily | SUPERFAMILY | 89360 | HesB-like domain | coord: 1..96 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 574..587 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 508..524 |
IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 104..707 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk05403 ID=Tk05403|Name=Tk05403|organism=Tigriopus kingsejongensis|type=polypeptide|length=973bp MGIRVSEQAAQHLRSQVFKDIEQDFLRFGVKASGCSGFSYFIELGKQVNE DDQVFDSHGVKVVIDKQSLELVDGTEIDYVQDDLSALFKFNNPKVTASCG CALPDQDKIATLPFSLKILLENLLRTENGVDVSKADIQAIINWDAKATPN DEIAFTPARVVMQDFTGVPAIVDLAAMRDAVVKLGGDVQKINPLAPAELV IDHSVMVDYFGTPQALEKNAELEFERNAERYEFLRWGQSAFDNFKVVPPR TGIVHQVNIEYLARTVFTKEENGEVTAYPDTLVGTDSHTTMVNGLGVLGW GVGGIEAEAAMLGQAITMLVPQVVGFKLKGKMPEGATATDLVLTVTQMLR NLGVVGKFVEFYGEGLAHLPLADRATIANMAPEYGATCGIFPIDEETLTY LRLTGREDDQIELVKEYAMAQGMFRTEDQPEARYTATLELDMGTVVPSLA GPKRPQDRIALTDMSEKTAEYVRAYAKDRDAKAGDVLTKSAIEITQDGNT FTLEDGAVTIAAITSCTNTSNPYVVVASGLLARNAVAKGLTVKPWVKTSL APGSKVVTDYLEKANLMGDLDKLGFDVVGYGCTTCIGNSGPLPEAIGNAV RNGDLTVSSVLSGNRNFEGRIHADIKMNFLASPPLVVAYALAGNIQVDMH KDPLGQDQQGNDVFLKDIWPSQKEIQEVVTANINQAMFKKSYSNVFKGDE RWAAIPITESDRYNWNSDSTYIQNPPYFVGMSKDPSDIKPIKNARVLAFL GDSITTDHISPAGSFNADSPAGKYLTEQGVARKDFNSYGSRRGNHQVMMR GTFANVRLRNELAPGTEGGWTRYQPEDSEMSIYDASMKYQENGVPLIVIA GKEYGTGSSRDWAAKGTLLLGVKAVVTESYERIHRSNLVGMGVLPLQFKE GESKVSHGLTGKEIYSIEGLENGSRHVDLVVNDESGKEIKRIELLVRIDT PREWDYYQHGGILHYVLRRLANS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
GO:0097428 | protein maturation by iron-sulfur cluster transfer |
Vocabulary: Molecular Function
Term | Definition |
GO:0051536 | iron-sulfur cluster binding |
GO:0005198 | structural molecule activity |
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