|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR025749 | Sphingomyelin synthase-like domain | PFAM | PF14360 | PAP2_C | coord: 193..266
e-value: 6.5E-25
score: 87.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 328..360 |
| None | No IPR available | PANTHER | PTHR21290:SF25 | SPHINGOMYELIN SYNTHASE-RELATED PROTEIN 1 | coord: 125..312 |
| None | No IPR available | PANTHER | PTHR21290 | SPHINGOMYELIN SYNTHETASE | coord: 125..312 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 215..220 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 246..265 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 156..196 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 133..155 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 197..214 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 266..360 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..132 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 241..245 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 221..240 |
| None | No IPR available | TMHMM | TMhelix | | coord: 133..155 |
| None | No IPR available | TMHMM | TMhelix | | coord: 197..214 |
| None | No IPR available | TMHMM | TMhelix | | coord: 221..243 |
| None | No IPR available | TMHMM | TMhelix | | coord: 248..267 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk05422 ID=Tk05422|Name=Tk05422|organism=Tigriopus kingsejongensis|type=polypeptide|length=360bp
MGASSPSWGSDLMRTVVVSEVSSSSSSSRSALMTAPSTPPSLRMVSGSAM
GSSSSSMGSGSSGSGLGPPLAPPIAGQRPQTAVHNLGDSAQIGDIWLADR
PFGSAETGWPDSRALCLESDTNARAGFILMRRFFSISGTIFLLRCVTMLI
TSLSVPGKHLDCSPRPYGDMWQKLYNAYLIWSGAGMTLQGVRTCGDYMFS
GHTVSLTLLNFFITEYTTRRVYFLHTFTWICNVFGIFFILAAHEHYSIDV
FIAFYISTRLFLYYHTLANNKGSSRIGQRAWFYFPLFYFFEANVDGKVPN
VFEWPIRIEDLKSLSQKILSYLPDEKLFMSPKPKESFDAGLRQSSQDGPV
PAQANDKKKD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR025749 | Sphingomyelin_synth-like_dom |
|
