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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PRINTS | PR00047 | STROIDFINGER | coord: 244..252 score: 65.67 coord: 252..260 score: 56.77 coord: 195..211 score: 49.44 coord: 211..226 score: 61.15 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | SMART | SM00399 | c4gold | coord: 192..263 e-value: 3.4E-37 score: 139.6 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PFAM | PF00105 | zf-C4 | coord: 194..261 e-value: 1.1E-29 score: 102.6 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS00031 | NUCLEAR_REC_DBD_1 | coord: 195..221 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS51030 | NUCLEAR_REC_DBD_2 | coord: 192..267 score: 19.89 |
IPR001723 | Nuclear hormone receptor | PRINTS | PR00398 | STRDHORMONER | coord: 256..266 score: 41.58 coord: 411..427 score: 30.17 coord: 390..411 score: 23.6 coord: 505..520 score: 26.61 coord: 559..576 score: 32.91 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | SMART | SM00430 | holi | coord: 389..571 e-value: 1.3E-15 score: 67.9 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | PFAM | PF00104 | Hormone_recep | coord: 384..571 e-value: 1.0E-13 score: 51.2 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | PROSITE | PS51843 | NR_LBD | coord: 349..593 score: 26.8 |
None | No IPR available | GENE3D | 1.10.565.10 | | coord: 359..591 e-value: 5.6E-55 score: 188.4 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..30 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..49 |
None | No IPR available | PANTHER | PTHR24080 | FAMILY NOT NAMED | coord: 181..312 coord: 307..590 |
None | No IPR available | CDD | cd07168 | NR_DBD_DHR4_like | coord: 189..276 e-value: 8.66111E-60 score: 191.619 |
None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 193..274 |
IPR013088 | Zinc finger, NHR/GATA-type | GENE3D | 3.30.50.10 | | coord: 185..296 e-value: 3.1E-34 score: 119.2 |
IPR035500 | Nuclear hormone receptor-like domain superfamily | SUPERFAMILY | 48508 | Nuclear receptor ligand-binding domain | coord: 327..449 coord: 265..276 coord: 476..580 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk05482 ID=Tk05482|Name=Tk05482|organism=Tigriopus kingsejongensis|type=polypeptide|length=593bp LQHNSVSNSLSVSSSFMGVSPMSEKPPSIHESSLITKDHHHHHHHHRNTL KWAKNCNLAVSTSLPTSVPAPESPPKYMVSPLYPNSMVVRQDEHHYEEHH RLSEQAQKISSAVDGMLSLQSANTVARVSSSGSSMEKVFPVCPRSEGSSY TRGIPINMEKLWDGDRTQLPANAKKLTEGTTQEGDDHIEEESLICMICED KATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYC RFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGG EISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDH MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQ WTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTD GEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIA LFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHH PLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
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