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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR005828 | Major facilitator, sugar transporter-like | PFAM | PF00083 | Sugar_tr | coord: 415..655 e-value: 1.7E-10 score: 40.3 |
None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 311..414 e-value: 1.8E-11 score: 45.5 |
None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 415..660 e-value: 4.2E-35 score: 123.3 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 148..163 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 142..163 |
None | No IPR available | PANTHER | PTHR24064:SF411 | SUBFAMILY NOT NAMED | coord: 301..413 |
None | No IPR available | PANTHER | PTHR24064:SF411 | SUBFAMILY NOT NAMED | coord: 412..661 |
None | No IPR available | PANTHER | PTHR24064 | FAMILY NOT NAMED | coord: 301..413 |
None | No IPR available | PANTHER | PTHR24064 | FAMILY NOT NAMED | coord: 412..661 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 383..481 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..338 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 599..620 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 539..558 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 506..527 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 588..598 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 564..587 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 626..647 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 360..364 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 621..625 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 501..505 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 528..538 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 365..382 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 648..661 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 559..563 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 339..359 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 482..500 |
None | No IPR available | TMHMM | TMhelix | | coord: 539..558 |
None | No IPR available | TMHMM | TMhelix | | coord: 482..501 |
None | No IPR available | TMHMM | TMhelix | | coord: 563..585 |
None | No IPR available | TMHMM | TMhelix | | coord: 505..527 |
None | No IPR available | TMHMM | TMhelix | | coord: 630..647 |
None | No IPR available | TMHMM | TMhelix | | coord: 363..385 |
None | No IPR available | TMHMM | TMhelix | | coord: 598..620 |
IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 337..647 e-value: 4.62816E-29 score: 116.644 |
IPR036259 | MFS transporter superfamily | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 337..657 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk06484 ID=Tk06484|Name=Tk06484|organism=Tigriopus kingsejongensis|type=polypeptide|length=661bp MNLIPIQMVRLGTKGAKAPKIIMPADESVCLADFCDIFRCHGYLPRNFTT QEKDGLDKINSMGDYEAIYPDLKVPKPEVGSTELILGPPETLLKLMKLQE KETRSDIEGDRDYFESLQEFLPYLSKVQTRLRSSLHTAITSDFQGSSSNH EKIRRRDTIPRSSKAKNALDSMFVSHQERSHEGNPAPHPDLMEENEEERI LEIWQLPEDPADAYCDEAEMNGLQKKCESLIFQCISPLSLSMDDEKFKAF QDLIGNGSQSYLVHQWITMSAPRLPDGAMDKCHVFDVDYSTWDQQRPNES TRVRKCTHWDHDTSMFQNTITQRWELVCDRKHMSRVVQMVYFAGNFIGVG LSGPLSDIWGRKVGYLLPLTGCIVFGALAPMVPNLSAWMCMRFIVGGCSL GFKNVASVYIVELTKSPRWLLAQGQFDQAKVIMRIACSTNKIPVKASSEF VEAQKLKKDQDPQSDRATILDMFRNPGIRRNSLIFGFCWMSFSMGYFGLF YNTPAFSLNIFLVFVLPALILVPMSFVQIWLENKLGRKVMLTAALILAGC LLLVILALPTGSVAITVCAWIGTMACSFAFGVGYNFTRELFPTVLRTTSL SFCSAMARVGSFASPFIAMLDVLGPKIPLLVDGAVVFVAGICSIWIWPET KTVRLPDSIEE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
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