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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR004087 | K Homology domain | SMART | SM00322 | kh_6 | coord: 378..451
e-value: 0.01
score: 25.0
coord: 137..209
e-value: 5.1E-12
score: 55.9
coord: 54..126
e-value: 3.6
score: 10.8 |
| IPR036612 | K Homology domain, type 1 superfamily | GENE3D | 3.30.1370.10 | | coord: 136..212
e-value: 1.5E-16
score: 61.9 |
| IPR036612 | K Homology domain, type 1 superfamily | GENE3D | 3.30.1370.10 | | coord: 54..127
e-value: 5.5E-11
score: 44.1
coord: 379..453
e-value: 1.7E-9
score: 39.3 |
| IPR036612 | K Homology domain, type 1 superfamily | SUPERFAMILY | 54791 | Eukaryotic type KH-domain (KH-domain type I) | coord: 130..212 |
| IPR036612 | K Homology domain, type 1 superfamily | SUPERFAMILY | 54791 | Eukaryotic type KH-domain (KH-domain type I) | coord: 381..440 |
| IPR036612 | K Homology domain, type 1 superfamily | SUPERFAMILY | 54791 | Eukaryotic type KH-domain (KH-domain type I) | coord: 58..126 |
| IPR004088 | K Homology domain, type 1 | PFAM | PF00013 | KH_1 | coord: 382..438
e-value: 2.3E-5
score: 24.0
coord: 58..118
e-value: 2.5E-5
score: 23.9
coord: 142..205
e-value: 4.4E-12
score: 45.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 487..531 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 487..502 |
| None | No IPR available | PANTHER | PTHR10288 | KH DOMAIN CONTAINING RNA BINDING PROTEIN | coord: 56..438 |
| None | No IPR available | PANTHER | PTHR10288:SF142 | RNA-BINDING PROTEIN NOVA-1 | coord: 56..438 |
| None | No IPR available | PROSITE | PS50084 | KH_TYPE_1 | coord: 379..447
score: 10.923 |
| None | No IPR available | PROSITE | PS50084 | KH_TYPE_1 | coord: 138..204
score: 16.416 |
| None | No IPR available | CDD | cd02396 | PCBP_like_KH | coord: 143..205
e-value: 4.7171E-13
score: 61.7235 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk06548 ID=Tk06548|Name=Tk06548|organism=Tigriopus kingsejongensis|type=polypeptide|length=531bp
MDTRKRSMADSPHKGSKSLPSKTRKDNHSGAPTKDVGAPHFAPVDAGTPL
PPQPCINVKFLIPSRAMGPIMGRKGEALNQWQQTNLKVKISKANSFFPGT
QRRVCLMIGAVEKVTEALIAFNDKIWSRDGVQFDAAKELEMTLVVPNETA
GLIIGSGGRFIKDLVNETGADIKLSRKEDDFIVSERKVVVTGRRDSILEA
LGRILKQVQEDPYSGSCLTVDYDPDGRFSRSKDKGASKPEEMASDPGHAI
DRSDKSSPFTVHLSSGELMHLKMKMDGSHSHIDPNLTEQYLHALGNNIRQ
SGIYPPPSTDDILRSFSTLISHGIFQFEFTANRPPPAQPPFVVEEPSHMR
KATYPPGPPPLGAPWPEIPPSATDGPQIQEEEKIEIEDGSIGSIMGRGGQ
ILSEIQKSSRSNIVISPMGVFASGTRNRIIFVAGDSQDLLHIHTLHLSRS
NHHSIDHSLGVADRIRPERGVVGSCLTYLPQDVLTTRSTRGPNWNEGQAT
NPVEAKFSPAGPASPSAAGDPAGGLHGGYKS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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