Tk06620, Tk06620 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06620
Unique NameTk06620
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length560
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPRINTSPR00078G3PDHDRGNASEcoord: 334..347
score: 67.71
coord: 494..509
score: 57.04
coord: 398..414
score: 44.44
coord: 454..471
score: 45.05
coord: 371..389
score: 65.02
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 39..242
e-value: 5.0E-6
score: 36.0
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainSMARTSM00846gp_dh_n_7coord: 243..377
e-value: 2.6E-54
score: 196.4
IPR020828Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainPFAMPF00044Gp_dh_Ncoord: 248..327
e-value: 8.5E-24
score: 83.7
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 45..204
e-value: 8.2E-13
score: 49.0
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 45..204
e-value: 1.7E-13
score: 45.8
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 37..242
e-value: 1.2E-12
score: 49.8
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domainPFAMPF02800Gp_dh_Ccoord: 383..537
e-value: 8.8E-56
score: 187.8
NoneNo IPR availableGENE3D3.30.360.10coord: 376..539
e-value: 4.8E-120
score: 402.4
NoneNo IPR availableGENE3D3.40.50.720coord: 245..375
e-value: 4.8E-120
score: 402.4
coord: 540..549
e-value: 4.8E-120
score: 402.4
NoneNo IPR availablePANTHERPTHR43148FAMILY NOT NAMEDcoord: 248..557
NoneNo IPR availablePANTHERPTHR43148:SF2GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C-RELATEDcoord: 248..557
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 43..243
e-value: 5.84195E-6
score: 45.017
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 377..538
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 4..247
IPR003698Lipoyl synthaseHAMAPMF_00206Lipoyl_synthcoord: 1..280
score: 112.38
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 248..405

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold16_size723419-snap-gene-4.0-mRNA-1maker-scaffold16_size723419-snap-gene-4.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06620 ID=Tk06620|Name=Tk06620|organism=Tigriopus kingsejongensis|type=polypeptide|length=560bp
LPTGKKYTQLRGLVEKYDLHTICTSGSCPNMGECWGEGTATFMILGNVCT
RSCGFCGVKTGRPEQVDWAEPEKVGRSIKIMGISHAVITSVDRDDLKDMG
SIIWAETVQAIRRMNPETTLETLIPDFQGIERHIDRIIAVSPEVVSHNME
TVKRLTREVRIQAKYERSLGVLAYLKKQGIRRTKSGIMLGLGELEEEVIT
TLKDLREANVDVVTIGQYLQPSKRHLPVKEFITPDQFKKYEEIGLAQAHP
HINIVAINDLADSRTLAHLLKYDSIHGVLSDTISHDANHIIVNNKAVRLS
NESHPKNINWKALQVAIVVECTGKFKTTTDLQIHLANGAKKVILSAPPEE
EDIKMIVFGINQNTLTPTDDIISGASCTTNNAAPMIKVINDLCGISQAYI
TTIHSYTSDQSLHDQPHRDLRRARAAAQSIVPTTTGAAKALTRIFPELAS
VIGGCGIRVPVPNGSLTDITFNVKKETTISEINNTFRAAAQNELKNILLY
TEDPIVSIDINNSMHSCTFDSQMTSVIGKMVKIIGWYDNETGYSSRIIDL
ITYMNNKQLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020831GlycerAld/Erythrose_P_DH
IPR006638Elp3/MiaB/NifB
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR007197rSAM
IPR013785Aldolase_TIM
IPR020829GlycerAld_3-P_DH_cat
IPR003698Lipoyl_synth
IPR036291NAD(P)-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0016992lipoate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009107lipoate biosynthetic process
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