Tk06639, Tk06639 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06639
Unique NameTk06639
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length507
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 206..230
e-value: 0.0038
score: 26.5
coord: 178..200
e-value: 3.9E-4
score: 29.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 208..230
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 180..200
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 206..235
score: 15.625
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 178..205
score: 15.168
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 208..230
e-value: 0.0067
score: 16.7
NoneNo IPR availableGENE3D3.30.160.60coord: 175..207
e-value: 4.2E-11
score: 44.5
NoneNo IPR availableGENE3D3.30.160.60coord: 208..234
e-value: 2.2E-13
score: 51.8
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 179..201
e-value: 4.0E-6
score: 26.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..507
NoneNo IPR availablePANTHERPTHR44530FAMILY NOT NAMEDcoord: 123..309
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 187..243

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1maker-scaffold1475_size39547-snap-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06639 ID=Tk06639|Name=Tk06639|organism=Tigriopus kingsejongensis|type=polypeptide|length=507bp
LCPPWIRLEHANMYAGFSPPRNGMTFNASLATPKRGGASASLGSSPYPSS
SPGRHLLSSSPLSWLAGRDHGGSPLSTSPPFKPPGEATPAHWASSPRVLL
DWSQRRPESPHHLAMRLGPQPEAAAPPPESPTWLRPLPDSPHGLSQGGGP
RDTGKRGRPRADHINHLIIKGSSSPSEIKCKVCSRVFPREKSLQAHLRTH
TGERPYLCDFPGCAKRFTQSGQLKTHQRLHAGEKPFVCSAHGCGNRYTHA
NRQCPLHPLHKPQRSTELVLQPVFANGEDRSTILQWLSKYRQEREEKTPG
KVPRLASPSLTDAENPWVSALDLQPGSPHDLNQPKKCKTKRGLDTELEQE
NRPQSENVSLPEPSILAARLGISPHRQTLGDITPTKSSSNVLKIKKRWLQ
GIFDEEKQRQEAASPLGPTLSSPSSTSSPHRASSKSFSEDLACPIQWNED
DEDAPLGTSISAPRSPKSWVVARALVDLKASRATMSGEQEDNQPLNLSVP
KRSSLDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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