Tk06728, Tk06728 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06728
Unique NameTk06728
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length186
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2510coord: 1..105
e-value: 4.0E-30
score: 106.5
NoneNo IPR availableGENE3D3.30.70.3190coord: 106..186
e-value: 2.3E-18
score: 67.8
NoneNo IPR availablePANTHERPTHR21568UNCHARACTERIZEDcoord: 2..186
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 88..186

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold899_size83673-snap-gene-0.18-mRNA-1maker-scaffold899_size83673-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06728 ID=Tk06728|Name=Tk06728|organism=Tigriopus kingsejongensis|type=polypeptide|length=186bp
LVDGERKAESSVEELLMAEVKPSMVFDSFNFSSSGREDVDVRMLGMGRPF
MFELVNPRKTMFKPEEMADIQCRINAHSTLVQVRDLQIVSKSDIVKLKEG
EDQKKKTYRALCAITPAPGQTISWDKVKEQLEGIKDLELSQRTPIRVLHR
RPNAIRRRTVYFMEVTPLSEDQFILRLASQAGTYIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
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