Tk06977, Tk06977 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06977
Unique NameTk06977
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length777
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 381..408
NoneNo IPR availableGENE3D2.30.30.40coord: 689..773
e-value: 1.6E-14
score: 55.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 745..777
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 745..769
NoneNo IPR availablePANTHERPTHR22826RHO GUANINE EXCHANGE FACTOR-RELATEDcoord: 602..744
NoneNo IPR availablePANTHERPTHR22826RHO GUANINE EXCHANGE FACTOR-RELATEDcoord: 168..338
coord: 359..596
NoneNo IPR availablePANTHERPTHR22826:SF97GUANINE NUCLEOTIDE EXCHANGE FACTOR VAV3coord: 168..338
coord: 602..744
coord: 359..596
NoneNo IPR availableCDDcd00174SH3coord: 688..741
e-value: 1.0906E-9
score: 52.4651
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 478..596
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 722..731
score: 29.77
coord: 703..718
score: 26.22
coord: 733..745
score: 38.07
coord: 687..697
score: 35.87
IPR001452SH3 domainSMARTSM00326SH3_2coord: 687..746
e-value: 8.0E-14
score: 61.9
IPR001452SH3 domainPFAMPF00018SH3_1coord: 690..739
e-value: 2.2E-7
score: 30.3
IPR001452SH3 domainPROSITEPS50002SH3coord: 684..747
score: 22.007
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 169..281
e-value: 1.7E-6
score: 37.6
IPR001715Calponin homology domainPFAMPF00307CHcoord: 170..285
e-value: 6.4E-14
score: 52.0
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 167..286
score: 16.354
IPR000980SH2 domainSMARTSM00252SH2_5coord: 568..669
e-value: 1.1E-4
score: 31.5
IPR000980SH2 domainPFAMPF00017SH2coord: 602..663
e-value: 5.9E-8
score: 32.6
IPR000980SH2 domainPROSITEPS50001SH2coord: 570..683
score: 15.269
IPR000219Dbl homology (DH) domainSMARTSM00325RhoGEF_3coord: 298..467
e-value: 5.2E-17
score: 72.5
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 355..466
e-value: 1.2E-26
score: 94.0
IPR000219Dbl homology (DH) domainPROSITEPS50010DH_2coord: 304..468
score: 21.685
IPR000219Dbl homology (DH) domainCDDcd00160RhoGEFcoord: 359..466
e-value: 4.53186E-25
score: 100.45
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 478..596
e-value: 5.8E-27
score: 96.1
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 71..154
e-value: 2.2E-5
score: 25.3
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 164..330
e-value: 2.8E-51
score: 175.4
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 167..299
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 597..688
e-value: 9.3E-16
score: 59.6
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 600..685
coord: 716..742
IPR035899Dbl homology (DH) domain superfamilyGENE3D1.20.900.10coord: 335..476
e-value: 1.2E-36
score: 128.3
IPR035899Dbl homology (DH) domain superfamilySUPERFAMILY48065DBL homology domain (DH-domain)coord: 356..489
IPR001331Guanine-nucleotide dissociation stimulator, CDC24, conserved sitePROSITEPS00741DH_1coord: 416..441
IPR037832Vav, PH domainCDDcd01223PH_Vavcoord: 484..596
e-value: 1.1478E-44
score: 154.329
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 681..752

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold693_size110418-snap-gene-0.23-mRNA-1maker-scaffold693_size110418-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06977 ID=Tk06977|Name=Tk06977|organism=Tigriopus kingsejongensis|type=polypeptide|length=777bp
LGRTPGVVAGGERKLARAENININRLGIESKTALFRVKYQQWPRNRMVFV
PPCMVKHYADMASHRLGTLSYFRDRYHFPLSSGPYSVGSVDLATSKIFFR
LYYPHGFHSSPKAKREILEANHQRWTKWLPEPEYAGAYLSFKYSKPIPPR
RSPCEGIKPFGDCCKMTELWKQCADWLCRMDILPNNHRITWPDAKIQDLA
YTLRDGVLLCHIAKALDESSLDLHSAHLRPQMAQFLCLKNIRLFLQSCLD
KFGLEETDLFHPTMLYDYSDFARVLHTLSKLSNCAKAKAKEVNGFPQQYK
EPSQDEEQIYRTLEDMVNEDNYKAFYYDHHGAESAYGKMNRPYYSEGQKD
EDIYEDFKKIGEIFIEYKKRFLKYGDYCSDLPKAQEALDALLNKAENVRD
EITQCEQNANEGKFRLRDLLAVPMQRILKYHLLLRELLSNTPSTHEEHHT
LKQAYEAMLDVSDFINEVKRDSEQLGIINEIESSITDWNLPEGVCLKDYG
RLLSDGELKVQSHDTNGKTKLRFVFVFDKIILMCKATRGDHYAYKNSLKL
SDYRVEQDNIIRRLGRDSRWGYNFILVHKDNITAYTMFTKKEEDKNSRFP
LATFLVRLRVQNGEKLGYALSLKVDDDVKHMKICTSVDGDNSYQYHLSDK
RKFGSIVELITYYSRNSLKESFTGLDKVLQFPIGEVSRVVASYDFQPDVT
DCNMLPMKTGDEVVIIDKYGDSQGWWKACFNGKVGFVPKNFVEELSDDDP
NSKETASLNESHDDEVATTSTDVEGTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR001715CH-domain
IPR000980SH2
IPR000219DH-domain
IPR011993PH-like_dom_sf
IPR029058AB_hydrolase
IPR036872CH_dom_sf
IPR036860SH2_dom_sf
IPR035899DBL_dom_sf
IPR001331GDS_CDC24_CS
IPR037832PH_Vav
IPR036028SH3-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO:0005085guanyl-nucleotide exchange factor activity
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
GO:0035556intracellular signal transduction
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