Tk06991, Tk06991 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06991
Unique NameTk06991
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length508
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 491..505
score: 40.36
coord: 278..292
score: 42.74
coord: 406..420
score: 46.07
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 212..249
e-value: 2.1E-8
score: 43.9
coord: 300..339
e-value: 4.1E-4
score: 29.7
coord: 254..291
e-value: 2.2E-7
score: 40.5
coord: 467..504
e-value: 1.1E-8
score: 44.9
coord: 422..464
e-value: 1.8E-4
score: 30.9
coord: 342..379
e-value: 2.8E-6
score: 36.9
coord: 382..419
e-value: 1.1E-5
score: 34.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 215..249
e-value: 1.3E-6
score: 29.0
coord: 385..419
e-value: 1.3E-5
score: 25.8
coord: 425..464
e-value: 0.027
score: 15.2
coord: 257..291
e-value: 1.4E-6
score: 28.8
coord: 303..338
e-value: 0.0016
score: 19.1
coord: 469..504
e-value: 5.9E-6
score: 26.8
coord: 343..379
e-value: 1.0E-7
score: 32.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 389..428
score: 13.483
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 261..293
score: 13.048
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 474..508
score: 13.316
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 307..348
score: 13.583
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 219..258
score: 14.519
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 349..379
score: 11.143
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 434..473
score: 11.645
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 207..301
e-value: 1.5E-24
score: 88.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 302..507
e-value: 2.4E-58
score: 199.4
IPR001810F-box domainPFAMPF12937F-box-likecoord: 123..164
e-value: 2.4E-8
score: 33.7
IPR001810F-box domainPROSITEPS50181FBOXcoord: 118..164
score: 13.154
NoneNo IPR availableGENE3D1.20.1280.50coord: 110..206
e-value: 7.0E-16
score: 59.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR44007:SF7SUBFAMILY NOT NAMEDcoord: 71..507
NoneNo IPR availablePANTHERPTHR44007FAMILY NOT NAMEDcoord: 71..507
NoneNo IPR availableCDDcd00200WD40coord: 215..504
e-value: 1.41126E-79
score: 248.019
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 491..505
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 451..465
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 236..250
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 278..292
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 366..380
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 406..420
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 219..508
score: 63.697
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 211..504
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 110..206

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold430_size173499-snap-gene-0.41-mRNA-1maker-scaffold430_size173499-snap-gene-0.41-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06991 ID=Tk06991|Name=Tk06991|organism=Tigriopus kingsejongensis|type=polypeptide|length=508bp
LAVRTPEAMRLEAPDNVLGSDGRPPALVWSPARRSHSLPQHYRSPPPPDC
SPLRAGPTGEDVRQRIRLMSRWMRDFAPADRLTAFQALQPALSAREYHWL
SSRLPRPDLHAFCPPDCQDFLRLLPDPLVRKILAYLEPTDLARAAQVCSA
WRPWLEADWLWRRLAARSPWRLGPDEHAVQLARCQRRAPDGRVVWKDIFR
ERFKLRRCWLAGQCHVRTFEGHTGAVSCVQFDSSRIVSGSHDTTIRVWNI
RTNSRWSVMTLTGHSGAVRCLHLEGDRVASGSTDRTIKVWDLDMQSEWSA
IACKVTMIGHADTVRSVQMCNAQNLVVSGSYDATLKIWCLKTGTCLQTLR
GHESRVLCQTWDGVILLSGSADKTIKIWNTGTAACRGLLRGHQDAVTCLS
MEGVKIVSGSLDRTIKLWDLNSLTCVSTLDWMSSEGHTGVIRCLQADPWR
IVSAADDKTLKVWNLASGQRLVTLRSHTDGVTCLRFNDFVIVSGSYDKTV
KLWDFTVC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001810F-box_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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