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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000092 | Polyprenyl synthetase | PFAM | PF00348 | polyprenyl_synt | coord: 47..288
e-value: 5.0E-65
score: 219.0 |
| IPR008949 | Isoprenoid synthase domain superfamily | GENE3D | 1.10.600.10 | | coord: 39..338
e-value: 3.0E-108
score: 363.3 |
| IPR008949 | Isoprenoid synthase domain superfamily | SUPERFAMILY | 48576 | Terpenoid synthases | coord: 46..329 |
| None | No IPR available | SFLD | SFLDG01017 | Polyprenyl_Transferase_Like | coord: 38..327
e-value: 0.0
score: 195.6 |
| None | No IPR available | SFLD | SFLDS00005 | Isoprenoid_Synthase_Type_I | coord: 51..288
e-value: 3.6E-39
score: 129.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 354..372 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 353..372 |
| None | No IPR available | PANTHER | PTHR12001 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE | coord: 42..333 |
| None | No IPR available | PANTHER | PTHR12001:SF44 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE | coord: 42..333 |
| None | No IPR available | CDD | cd00685 | Trans_IPPS_HT | coord: 44..260
e-value: 6.36375E-68
score: 212.797 |
| IPR033749 | Polyprenyl synthetase, conserved site | PROSITE | PS00444 | POLYPRENYL_SYNTHASE_2 | coord: 219..231 |
| IPR033749 | Polyprenyl synthetase, conserved site | PROSITE | PS00723 | POLYPRENYL_SYNTHASE_1 | coord: 98..112 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07011 ID=Tk07011|Name=Tk07011|organism=Tigriopus kingsejongensis|type=polypeptide|length=372bp
MSANEFRPSFSEPVESSRMSHKLPKGFTPSGDVPLPLSKSNDVEQDQKLL
EPYAYVLQVSGKDVRGKLLAAFNVWLDIPEDKLKQIGEIVKMLHNASLLL
DDIQDNSVLRRGIPVAHKICGEPSTINAANYVMFIALERTMLLGHPEAVQ
VFTEQMLELHRGQGMDIFWRDNNHCPSEEEYREMTIRKTGGLFNLAVRLM
QLFAKHPLKSDFAELGKLFGLYFQVRDDYANLCLKDYSENKSFAEDLTEG
KFSFPIIHAISKGSSGRQIRQILGLRTTEVEVKKYCIGLLEKSGSFDYTQ
TYLTNLDVKVRSEIRELGGNHVLEQLLDELKDWMELKSWNNDLMRFTPKA
LSPPSRTCLISSGTGSSRKEAE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
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| GO:0008299 | isoprenoid biosynthetic process |
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