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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001849 | Pleckstrin homology domain | SMART | SM00233 | PH_update | coord: 405..513 e-value: 3.9E-9 score: 46.4 |
IPR001849 | Pleckstrin homology domain | PFAM | PF00169 | PH | coord: 419..509 e-value: 2.8E-7 score: 30.9 |
IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 403..511 score: 7.604 |
IPR019749 | Band 4.1 domain | SMART | SM00295 | B41_5 | coord: 67..605 e-value: 7.6E-25 score: 98.5 |
None | No IPR available | GENE3D | 3.10.20.90 | | coord: 20..74 e-value: 1.8E-22 score: 81.5 |
None | No IPR available | GENE3D | 3.10.20.90 | | coord: 75..181 e-value: 9.0E-7 score: 31.1 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 192..245 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 219..245 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 202..217 |
None | No IPR available | PANTHER | PTHR16160:SF13 | FERMITIN 2-RELATED | coord: 25..712 |
None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 601..689 |
None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 410..515 |
IPR019748 | FERM central domain | PFAM | PF00373 | FERM_M | coord: 317..605 e-value: 4.2E-36 score: 123.8 |
IPR019748 | FERM central domain | CDD | cd14473 | FERM_B-lobe | coord: 326..359 e-value: 2.1184E-5 score: 41.4631 |
IPR019748 | FERM central domain | CDD | cd14473 | FERM_B-lobe | coord: 548..597 e-value: 0.00950558 score: 34.1443 |
IPR014352 | FERM/acyl-CoA-binding protein superfamily | GENE3D | 1.20.80.10 | | coord: 311..383 e-value: 1.3E-7 score: 33.8 |
IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 405..547 e-value: 2.1E-48 score: 165.6 |
IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 600..694 e-value: 1.4E-13 score: 53.1 |
IPR037843 | Kindlin/fermitin | PANTHER | PTHR16160 | FAMILY NOT NAMED | coord: 25..712 |
IPR035963 | FERM superfamily, second domain | SUPERFAMILY | 47031 | Second domain of FERM | coord: 308..362 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07014 ID=Tk07014|Name=Tk07014|organism=Tigriopus kingsejongensis|type=polypeptide|length=712bp MADWDEEVTVDLFFLATWTDHPVSGPNIAMDWSDHAIWWPEKNIWLDKTR WTLDQFNLTADAIIHFTPMHKMLRIQLPDLRYIDCNVDFSIRTFTAVINI CTELEIRHPEEMSLSKPVAEEHLKFNYGEYRIQEEKKRRVTLGTMPAHSQ HTLHHQSALDISSPVVDRADTNTFVANSATLGRKISSNSWTSSPAKFRSL GRNGTLDHHRRRSEHSGPYNGTFRPNGTLSPYSNGNGHLSTTSLTPGFPG SGSEWSLAISPPPSQEAKYSIVRPKNLTERARLNVGWLDSSLSLMEQGIR DFDTLLLRFKFYSFYNLNTKTDPVRINLIYEQAKWQILNEGIDCTEEEMM LFAALQLQVGLQANVAQPNDDDENEDDIDAALTDLQISLEGGTNNANGID IMAVPSLGDYLRYLRPKRFTLKGHKRCYFVLRDLQLCAFKTKDDSQDYSR GPSFTVNLKGCEVSPGVNIAQGKYGIKLAIPSQDGMSDLWLRCESEGQYS QWMAACRLAAKGKTMADCGFESEVKSIQAFLSMQHPANAPVINPATLDIN VEEYVASRFLRKMKSRLRNKILEAHTNVKDLNLIEAKMNFIKAWQSLPDY GVSLFVARFLGEKKNELMGIAFNRLMRMNLQTGDHIKTWRYNTIKAWNVN WETKHMMIQLGDGKNVIFKTLSSDCKVVHEFIGGYIFLSMRSKDANQQLD EELFHKLTGGWN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0007229 | integrin-mediated signaling pathway |
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