Tk07038, Tk07038 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07038
Unique NameTk07038
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length474
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.810coord: 273..324
e-value: 3.1E-130
score: 435.4
coord: 26..91
e-value: 3.1E-130
score: 435.4
NoneNo IPR availableGENE3D2.30.40.20coord: 104..162
e-value: 3.1E-130
score: 435.4
NoneNo IPR availableGENE3D3.30.70.270coord: 92..103
e-value: 3.1E-130
score: 435.4
coord: 163..272
e-value: 3.1E-130
score: 435.4
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 13..460
NoneNo IPR availablePANTHERPTHR11076:SF33DNA POLYMERASE KAPPAcoord: 13..460
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 72..325
IPR001126UmuC domainPFAMPF00817IMScoord: 100..245
e-value: 8.0E-44
score: 149.2
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 97..279
score: 55.769
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 336..446
e-value: 2.6E-17
score: 63.5
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 336..446
e-value: 3.9E-29
score: 103.2
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 336..438
IPR022880DNA polymerase IVHAMAPMF_01113DNApol_IVcoord: 94..450
score: 29.706
IPR022880DNA polymerase IVCDDcd03586PolY_Pol_IV_kappacoord: 98..438
e-value: 6.52745E-140
score: 403.055

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1013_size70870-snap-gene-0.18-mRNA-1maker-scaffold1013_size70870-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07038 ID=Tk07038|Name=Tk07038|organism=Tigriopus kingsejongensis|type=polypeptide|length=474bp
MSSTSSGIGMPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKS
QERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHI
DMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFI
AKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTD
TLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKP
NGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYER
RALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSS
VEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEP
TSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGNSGQQSISS
FLNAKRDSSKSFECPICLKDIQAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR022880DNApol_IV
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
GO:0003887DNA-directed DNA polymerase activity
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