Tk07143, Tk07143 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07143
Unique NameTk07143
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1992
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1662..1682
NoneNo IPR availableGENE3D1.10.287.70coord: 459..576
e-value: 3.8E-7
score: 31.9
coord: 1825..1962
e-value: 2.8E-29
score: 103.2
NoneNo IPR availableGENE3D1.10.287.70coord: 960..1071
e-value: 3.5E-36
score: 125.6
NoneNo IPR availableGENE3D1.10.287.70coord: 1570..1656
e-value: 3.2E-14
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1086..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1077..1126
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 1..159
coord: 820..1523
coord: 1542..1965
NoneNo IPR availablePANTHERPTHR10037:SF192VOLTAGE-DEPENDENT T-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1Hcoord: 1..159
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 413..643
NoneNo IPR availablePANTHERPTHR10037:SF192VOLTAGE-DEPENDENT T-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1Hcoord: 820..1523
coord: 1542..1965
NoneNo IPR availablePANTHERPTHR10037:SF192VOLTAGE-DEPENDENT T-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1Hcoord: 413..643
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1954..1992
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1860..1879
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 548..553
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1416..1432
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 528..547
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1526..1629
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1471..1504
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 974..998
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 999..1009
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1010..1026
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1710..1731
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1433..1443
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 901..973
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1654..1709
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1773..1790
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1898..1927
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1027..1045
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1046..1069
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 877..900
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1791..1839
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1743..1766
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..495
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 554..572
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1732..1742
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 844..865
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 122..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 496..516
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1928..1953
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1840..1859
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1505..1525
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1070..1343
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1405..1415
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1383..1404
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1344..1363
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 517..527
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1880..1897
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 573..843
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1444..1470
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 866..876
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1630..1653
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1364..1382
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1767..1772
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.492
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 842..1074
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1..149
coord: 492..546
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1708..1961
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1427..1527
coord: 1581..1659
coord: 1344..1400
NoneNo IPR availableTMHMMTMhelixcoord: 1932..1954
NoneNo IPR availableTMHMMTMhelixcoord: 974..996
NoneNo IPR availableTMHMMTMhelixcoord: 493..515
NoneNo IPR availableTMHMMTMhelixcoord: 1631..1653
NoneNo IPR availableTMHMMTMhelixcoord: 1711..1733
NoneNo IPR availableTMHMMTMhelixcoord: 1502..1524
NoneNo IPR availableTMHMMTMhelixcoord: 557..574
NoneNo IPR availableTMHMMTMhelixcoord: 1743..1765
NoneNo IPR availableTMHMMTMhelixcoord: 528..547
NoneNo IPR availableTMHMMTMhelixcoord: 1445..1467
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 877..899
NoneNo IPR availableTMHMMTMhelixcoord: 906..928
NoneNo IPR availableTMHMMTMhelixcoord: 1840..1862
NoneNo IPR availableTMHMMTMhelixcoord: 843..862
NoneNo IPR availableTMHMMTMhelixcoord: 1047..1069
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 1880..1892
score: 38.7
coord: 1009..1035
score: 52.89
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1..182
e-value: 1.6E-43
score: 148.6
coord: 842..1079
e-value: 4.3E-50
score: 170.1
coord: 476..578
e-value: 1.0E-14
score: 54.3
coord: 1344..1662
e-value: 9.1E-58
score: 195.3
coord: 1709..1964
e-value: 2.9E-53
score: 180.5
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 1..108
e-value: 3.0E-20
score: 74.5
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 1335..1486
e-value: 2.5E-27
score: 97.2
coord: 1699..1823
e-value: 3.0E-33
score: 116.4
coord: 832..959
e-value: 5.2E-30
score: 105.9

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold300_size216557-snap-gene-0.14-mRNA-1maker-scaffold300_size216557-snap-gene-0.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07143 ID=Tk07143|Name=Tk07143|organism=Tigriopus kingsejongensis|type=polypeptide|length=1992bp
MTVILLNCVTLGMFQPCEDPDCDTPRCQILKVCDDVIYLYFTVEMCIKML
AMGVAGKGCYLSETWNRLDCFIVIAGALEYCLDVEKLNLSAIRTVRVLRP
LRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLL
RQRCFIPEERHDYVRNSKFFNSTRKFQHWDSAKARHEDTAYQIVAALGGK
KMSSQGLLQEVQALIGDMDDAFLACMCLAEAIPEWTEEDDSGPDESHGND
LSITFQSLVWNHEVLADFFSELATEERKKADLFFRWLYENRTALAVALGE
DVRLSQFESDEEENDESDLVAESNGDPMNHFSHQSWQLKADPILSLQWLM
RRRADHMAKVLQLKDIAERTKDSNFLHFLRLHQDKLFGCNEESSKRIREV
ILDLELRKKEKNKNNQFSSWYYQTPELFDKDYICSTADSSGMHKCADLPV
FEEDGLECYANINTGLFNSTDCINWNQYFTDCKPGKMNPFHGAISFDNIG
LAWVAIFLVISLEGWTDVMYFVQDAHSFWNWVYFVMLIVVSLIGYFGNHS
EFKIGSFFMINLCLVVIATQFSETKRRETAKMKAERARFQSSSTLSSFTN
SETTNCYRQVIRLIAHLLRKAMSRLRKWYKRHRLEHLKRKEVELMETQDA
GQLRNYRVTKNVSTHTVIPVGDGRIEMRIELDDVIICESLAAEAKPICQS
EKMTQTDPCLLNRHQFQGRMGRGGVPGTTTPNGTSVCTHPTLTCQELLAL
SSALSATLTAQIGGFDANQIRRCSTQNLPDGPNGANHGSESGRCEEDDDD
DAGDVYELSVTPKTPSKCYSFFGCCLTCLNKLQTQLENFVDHNIFQRFIL
FCILINTFSMGIEFHKQPELLTKTVEVSNLAFSAIFAVEMALKLGAYGLF
RYISDGFNVFDGVIVIFSSMELYTGFVHGINDEGGSTGLSVLRTFRLLRI
LKLVRFLPNLRRQLVVMLRTMDNVAVFFGLLMLFIFIFSILGMNLFGCKF
CDGDVCDRKNFDTLLWATVTVFQVLTQEDWNIVLFLGMQRTSHWAALYFV
ILMTFGNYVLFNLLVAILVEGFSNQDEKRSSDRNSLYSKDANSGVGHSQS
PCHSLPNSTFGGNDDDGQGYNPRLGLSRGNLSNGSSIVKQMSYSQSPRLS
KSVIETLRNNVMEMGEPRQLVLPCPSCGETRVVMARQVRKEEVECNPLFA
EFLQQSRGISPPNGTMSVRRGSKTTNSMNRRRTSKCCSLAESDCSKCDLE
NCRLDSNSGFTDLPKAGKNGSNGRANSIHMMENGEGRPRIEFGCQGLWYT
LLYWRKSILARWERFKYDRQHFSLWVFKPEHRFREVCQDLTGRSWFDFIV
LTFIACNCITLAMERPNIPPWSNERRFLDILNHIFTFVFSIEMLLKAIAS
GRIWTKLSAAQPHIKAVSLAFPGLLYGEHAYFKSGWNIMDGSLVIISLID
TVMVVVLGQVTKIFGILRVFRLVRALRPLRVINRAPGLKLVVQTLLSSLK
PIGNIVLICCTFFIIFGILGVQVQYSVSLKWQRSGVSGAFHLCLQLFKGI
FYYCEGPDAHHIKNKTQCLELSGRGNRWINHKYNFDNLGHALMSLFVLSS
KDGWVNIMYQGLDAVGMDQQPRENFNEWRLVYFISFLLLVGFFVLNMFVG
VVVENFHRCRAEQEKEERARRAAKRAKKIEERRRKMLATPYYIHYSPTRL
MIHKMVTSKYFDLAISAVIGLNVITMAMEFYMMPNILAYALKVFNYFFTA
VFILEAGMKISALGLGRYLHDRWNQLDVVIVFLSIMGIVLEELKSDLMPI
NPTIMRVMRVLRIARVLKLLKMAKGIRALLDTVMQALPQVGNLGLLFFLL
FFIFAALGVEMFGRLECDDAHPCQGLGEHAHFRSFGMAFLTLFRIATGDN
WNGIMKDTLRDECEEGDDCLRNCCVSPYFAPLFFVVFVLMAQFVLVNVVV
AVLMKHLEESHKQVQSQECEPPSSQSWVVWPFLGVALGQDHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002077VDCCAlpha1
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005245voltage-gated calcium channel activity
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0070588calcium ion transmembrane transport
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0005891voltage-gated calcium channel complex
GO:0016020membrane
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