Tk07251, Tk07251 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07251
Unique NameTk07251
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length175
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008251Chromo shadow domainSMARTSM00300ChS_2coord: 105..167
e-value: 1.1E-30
score: 117.9
IPR008251Chromo shadow domainPFAMPF01393Chromo_shadowcoord: 112..164
e-value: 1.9E-28
score: 98.2
NoneNo IPR availableGENE3D2.40.50.40coord: 96..168
e-value: 5.4E-37
score: 127.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..114
NoneNo IPR availablePANTHERPTHR22812CHROMOBOX PROTEINcoord: 95..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availableCDDcd00034ChShcoord: 113..165
e-value: 1.42685E-20
score: 78.1376
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..28
score: 0.468
IPR038033Chromobox protein homologue 3PANTHERPTHR22812:SF110SUBFAMILY NOT NAMEDcoord: 95..171
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 111..169
score: 16.666
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 103..167

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07251 ID=Tk07251|Name=Tk07251|organism=Tigriopus kingsejongensis|type=polypeptide|length=175bp
MPVSLLVWTCQGSTTSSSVTSSSTFNWAACSTKGSTGADILRWFTRPPGL
RSVPNANLIHTLILGLEHGIDTFNQLGTEHDIALVDPSRLLWSGKKKKGD
DDRPRGFDRGLDPERIIGATDSSGELMFLIKWKGSDEADLVAAREANVKC
PQTVIKFYEERLTWHTSSQDDDNDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008251Chromo_shadow_dom
IPR038033CBX3
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005719nuclear euchromatin
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
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