Tk07256, Tk07256 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk07256
Unique NameTk07256
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length922
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availableGENE3D1.20.1420.30coord: 123..248
e-value: 6.4E-12
score: 47.2
coord: 725..914
e-value: 3.8E-9
score: 38.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..386
NoneNo IPR availablePANTHERPTHR11878SODIUM/CALCIUM EXCHANGERcoord: 18..918
NoneNo IPR availablePANTHERPTHR11878:SF26SUBFAMILY NOT NAMEDcoord: 18..918
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 151..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 876..895
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 245..723
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 919..922
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 855..875
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 823..843
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 747..751
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 724..746
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 844..854
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 896..918
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 780..822
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 752..779
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..244
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..28
score: 0.612
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.848
NoneNo IPR availableTMHMMTMhelixcoord: 724..746
NoneNo IPR availableTMHMMTMhelixcoord: 756..778
NoneNo IPR availableTMHMMTMhelixcoord: 821..843
NoneNo IPR availableTMHMMTMhelixcoord: 853..875
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 195..217
NoneNo IPR availableTMHMMTMhelixcoord: 227..244
NoneNo IPR availableTMHMMTMhelixcoord: 128..150
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 896..918
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
IPR004836Sodium/calcium exchanger proteinPRINTSPR01259NACAEXCHNGRcoord: 766..777
score: 59.21
coord: 753..765
score: 55.06
coord: 779..791
score: 75.3
coord: 792..805
score: 94.36
IPR004836Sodium/calcium exchanger proteinTIGRFAMTIGR00845TIGR00845coord: 27..919
e-value: 0.0
score: 1246.8
IPR003644Na-Ca exchanger/integrin-beta4SMARTSM00237NIbeta_1coord: 379..479
e-value: 6.1E-33
score: 125.4
coord: 515..614
e-value: 2.2E-30
score: 116.9
IPR003644Na-Ca exchanger/integrin-beta4PFAMPF03160Calx-betacoord: 384..478
e-value: 1.4E-27
score: 95.7
coord: 515..612
e-value: 9.6E-25
score: 86.6
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 72..242
e-value: 4.6E-27
score: 94.7
coord: 751..910
e-value: 4.2E-20
score: 72.1
IPR038081CalX-like domain superfamilyGENE3D2.60.40.2030coord: 519..671
e-value: 5.6E-46
score: 157.8
IPR038081CalX-like domain superfamilyGENE3D2.60.40.2030coord: 377..518
e-value: 3.2E-37
score: 129.1
IPR038081CalX-like domain superfamilySUPERFAMILY141072CalX-likecoord: 392..532
IPR038081CalX-like domain superfamilySUPERFAMILY141072CalX-likecoord: 526..671
IPR032452Sodium/calcium exchanger domain, C-terminal extensionPFAMPF16494Na_Ca_ex_Ccoord: 246..363
e-value: 5.2E-27
score: 94.7

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold286_size222086-snap-gene-1.17-mRNA-1maker-scaffold286_size222086-snap-gene-1.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk07256 ID=Tk07256|Name=Tk07256|organism=Tigriopus kingsejongensis|type=polypeptide|length=922bp
MTRLSGLRHGGLLFGVLLVAVALTMASASNETEPAPSGGIEGVNCGDGLI
VPIWRPFHNLSAGDRFGRGILYALLMIYLFIGVSIVSDRFMESIEMITAQ
EKELTVKDPHTGKNQVIVCKVWNETVANLTLMALGSSAPEILLSVVEIYA
KGFVAGDLGPGTIVGSAAFNLFMILGLCMYVIPDDEVRKIKHLRVFLITA
TWSVFAYVWLYAILGPISYGVVEPWEAGLTFLFFPLTVYTAYVADRRLFC
YKYMAKSYRMNDHGVIVQTEKGDDIETRGKEKFKDLDEDMDPALAEFERH
RREYINAMKRIRLENPNIDMAELELRAREEVMSKGPKSRAYYRLQATRKL
AGKQNLDKKLRDKLHEEADTKKNTEEVKEEEDEKKEDGVMRLFFDPPHYT
VMENIGTFETTVVREGGDMNVAVQVDFKTEDGTALAGPDYIERAGTLYFP
PGVTEQSITLEVLDDDVFEEDEHFYCRITNLRRKDGIEIPNIEVEEEDGS
SKVVPSIQLGTPALATIMVLDDDHGGVFQFESHEMEINEACGTLQLKVDR
ISGARGKVAIPFTTEEGTAKAGKDYTHVEGELIFGNEENAKVIEVPILEE
DSYEKNAVMYVVIGEPRHIAEGVNYEDIDAKDPEDLTEVEKIALLGRPRL
GDVTKVQIRIKESKEFKSSVDRMMQRGNASMVMGASSWVDQFLEAFTVSA
GDDDDEEGEDGEEAEEKMPTCGDYIMHFLTLFWKVIFCVIPPAGIANGYP
CFVISISMIGVCTAVIGDVAGHLGCFIYLKDSVNAIAFVALGTSVPDTFA
SKVAAIQDDHADASVGNVTGSNAVNVFLGIGIAWSMAAFYWWANGTTFDV
SPGSLGFSVSLFCCEALIAIAILLIRRNPAVGGELGGPKSVKTVTSSIFV
CLWLFYVMMSALEAYKVIDPGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004836Na_Ca_Ex
IPR003644Calx_beta
IPR004837NaCa_Exmemb
IPR038081CalX-like_sf
IPR032452Na_Ca_Ex_C-exten
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005432calcium:sodium antiporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006816calcium ion transport
GO:0007154cell communication
GO:0055085transmembrane transport
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