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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR007271 | Nucleotide-sugar transporter | PIRSF | PIRSF005799 | UDP-gal_transpt | coord: 6..353
e-value: 1.0E-67
score: 226.2 |
| IPR007271 | Nucleotide-sugar transporter | PFAM | PF04142 | Nuc_sug_transp | coord: 32..324
e-value: 1.8E-32
score: 112.7 |
| IPR007271 | Nucleotide-sugar transporter | PANTHER | PTHR10231 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER | coord: 6..337 |
| None | No IPR available | PANTHER | PTHR10231:SF50 | SUBFAMILY NOT NAMED | coord: 6..337 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 49..68 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 165..183 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 111..115 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 237..255 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 116..135 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 215..236 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 301..305 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 256..275 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..19 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 88..110 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 136..141 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 306..325 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 142..164 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 38..48 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 184..203 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 282..300 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 69..87 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 326..353 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 204..214 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 20..37 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 276..281 |
| None | No IPR available | SUPERFAMILY | 103481 | Multidrug resistance efflux transporter EmrE | coord: 82..157 |
| None | No IPR available | TMHMM | TMhelix | | coord: 19..36 |
| None | No IPR available | TMHMM | TMhelix | | coord: 252..274 |
| None | No IPR available | TMHMM | TMhelix | | coord: 46..68 |
| None | No IPR available | TMHMM | TMhelix | | coord: 215..237 |
| None | No IPR available | TMHMM | TMhelix | | coord: 295..317 |
| None | No IPR available | TMHMM | TMhelix | | coord: 81..103 |
| None | No IPR available | TMHMM | TMhelix | | coord: 113..135 |
| None | No IPR available | TMHMM | TMhelix | | coord: 184..203 |
| None | No IPR available | TMHMM | TMhelix | | coord: 142..164 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07665 ID=Tk07665|Name=Tk07665|organism=Tigriopus kingsejongensis|type=polypeptide|length=353bp
MMNILNNRDIFPTRLSKGIFVAYMALFIAQGLLVTASRKGTDIYPYNPTT
VVLLTELIKLTLATLIFLKDHSVMELLRSCYHHKTIVIPYMIPAFLYCLY
NNLSFTNLAAFDPTSYFILMQIRLLLTGVVFQFLFKRKLSRIQWLSLMLV
TLGCVIQKLDLQAIHHIFAVDQSTGSLLQNSSSFILILVQVSCSVFAGVY
NEYLIKSVAGQEVHIMVQNVYMCLDSIISNVAFLAYQGQLSTAFNLEALV
PIGQTFVVLIILNNAFIGIITSLFLKNLNSIIKAFASAIEIVFTAILSFV
LLGIPIYLNTVIAVAVVSYAVVLYAQHPVKPIQSVPTDEGHTKIEMEKLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007271 | Nuc_sug_transpt |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0000139 | Golgi membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport |
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