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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 110..123 score: 25.51 coord: 357..368 score: 67.52 coord: 243..256 score: 45.04 coord: 153..166 score: 49.85 coord: 167..182 score: 46.17 coord: 416..429 score: 43.88 coord: 133..141 score: 41.04 coord: 323..337 score: 33.88 coord: 229..242 score: 52.33 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 38..480 e-value: 3.6E-154 score: 514.0 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 319..494 e-value: 2.8E-59 score: 201.3 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 8..199 e-value: 1.5E-78 score: 265.3 |
IPR015932 | Aconitase, domain 2 | GENE3D | 3.40.1060.10 | | coord: 200..318 e-value: 9.6E-37 score: 127.3 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 538..578 e-value: 9.9E-12 score: 46.8 |
IPR006248 | Aconitase, mitochondrial-like | TIGRFAM | TIGR01340 | TIGR01340 | coord: 16..578 e-value: 1.1E-249 score: 828.7 |
None | No IPR available | PANTHER | PTHR43160:SF3 | ACONITATE HYDRATASE, MITOCHONDRIAL | coord: 16..578 |
None | No IPR available | PANTHER | PTHR43160 | FAMILY NOT NAMED | coord: 16..578 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 416..429 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 353..369 |
IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 14..527 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07776 ID=Tk07776|Name=Tk07776|organism=Tigriopus kingsejongensis|type=polypeptide|length=578bp MAVGPETPITLIESVYGTLDQRVGDFRTRQGRPLTLTEKILANHLDQPDA EVERGGSYVDFRPDRVAMQDATAQMAWLQFDTAGLTEVQVPTTTHCDHLI QAKVEAKQDLLRAIDTNEEVYHFLESISAKYGGGFWKPGSGIIHQVVLEN YAFPGGMMIGTDSHTPNAGGLGMIAIGVGGADAVDVMTGNPWNVRFPKMI GVHLTGELSGWAAPKDVILKVAEILTVKGGTGAIVEYIGPGAQAISATGK ATICNMGAEIGATTSLFAYDEAIARYLKSTGREATADAANAVAHHLRPDD EVLADPASYYDQVIEIDLSALTPHINGPHTPDLAREVKDLGAEARAEGWP LEISAALIGSCTNSSYEDITRAASIAREAKAKGLTLKTELLITPGSEQVR ATIERDGLLADFEALGATVLANACGPCIGQWDRSDEREPGIPNVIVTSYN RNFPKRNDGDAATLAFVTSPETVMALALAGNVDFDFVNGTITNDAGEEVK LSVPVGIELPPKGFDPGEDTFVAPPADGSGIDVAVSPTSDRLQLLTPFPA WDGNDYENLPILVKAQGKFTTDHISMAG back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
GO:0006099 | tricarboxylic acid cycle |
Vocabulary: Molecular Function
Term | Definition |
GO:0003994 | aconitate hydratase activity |
GO:0051539 | 4 iron, 4 sulfur cluster binding |
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