Tk08084, Tk08084 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08084
Unique NameTk08084
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length271
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 196..209
score: 35.13
coord: 209..223
score: 31.8
coord: 253..271
score: 29.27
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 6..271
e-value: 1.9E-64
score: 219.2
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 4..271
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 3..88
e-value: 2.7E-16
score: 59.2
coord: 193..271
e-value: 7.0E-17
score: 61.0
coord: 98..190
e-value: 4.2E-19
score: 68.2
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 97..186
score: 17.836
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 191..271
score: 16.785
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 3..87
score: 17.128
NoneNo IPR availablePANTHERPTHR24089FAMILY NOT NAMEDcoord: 5..270
NoneNo IPR availablePANTHERPTHR24089:SF451SUBFAMILY NOT NAMEDcoord: 5..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..161
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1604_size34042-snap-gene-0.17-mRNA-1maker-scaffold1604_size34042-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08084 ID=Tk08084|Name=Tk08084|organism=Tigriopus kingsejongensis|type=polypeptide|length=271bp
MDTPFYCDFIAGWVGGCAGIVVGHPLDTVKVRQQNATRDHGSMTKIMREC
IKHEGSRGFFKGLSFPVLSAGALNSIFFGVYGFTINQIHPKERSDSPSMS
SVFAAGIVGGFLQLSVACPVDLIKIKLQTQIGQSGGAHFKGPFDVIQKVC
AQQGVSGLYKGLGIMALRDCPSFGIYMIIYDHTVPVLSNHNVPLVSFISG
GIAGVISWLSIMPLDVVKSMLQADNPQNPRYHSILQAYRACVKQFGWRGF
FRGSLAVSLRAFPVNGATFLT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Add to Basket