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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 399..419 |
None | No IPR available | GENE3D | 1.10.565.10 | | coord: 817..1076 e-value: 1.2E-62 score: 213.7 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 799..814 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 789..814 |
None | No IPR available | PANTHER | PTHR24086:SF25 | NUCLEAR HORMONE RECEPTOR FTZ-F1 BETA | coord: 561..884 coord: 909..1077 |
None | No IPR available | CDD | cd06930 | NR_LBD_F2 | coord: 857..1045 e-value: 3.00335E-48 score: 167.017 |
None | No IPR available | CDD | cd07167 | NR_DBD_Lrh-1_like | coord: 633..722 e-value: 5.11474E-60 score: 197.677 |
None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 629..707 |
IPR001723 | Nuclear hormone receptor | PRINTS | PR00398 | STRDHORMONER | coord: 863..884 score: 28.48 coord: 1034..1051 score: 28.84 coord: 977..992 score: 31.69 coord: 694..704 score: 43.15 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PRINTS | PR00047 | STROIDFINGER | coord: 682..690 score: 54.12 coord: 649..664 score: 57.32 coord: 690..698 score: 53.93 coord: 633..649 score: 54.03 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | SMART | SM00399 | c4gold | coord: 630..701 e-value: 3.0E-36 score: 136.4 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PFAM | PF00105 | zf-C4 | coord: 632..699 e-value: 3.9E-27 score: 94.4 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS00031 | NUCLEAR_REC_DBD_1 | coord: 633..659 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS51030 | NUCLEAR_REC_DBD_2 | coord: 630..705 score: 19.528 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | SMART | SM00430 | holi | coord: 862..1046 e-value: 1.0E-23 score: 94.8 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | PFAM | PF00104 | Hormone_recep | coord: 905..1053 e-value: 2.3E-19 score: 69.7 |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | PROSITE | PS51843 | NR_LBD | coord: 820..1075 score: 32.71 |
IPR013088 | Zinc finger, NHR/GATA-type | GENE3D | 3.30.50.10 | | coord: 623..723 e-value: 1.2E-33 score: 117.4 |
IPR016355 | Nuclear hormone receptor family 5 | PANTHER | PTHR24086 | FAMILY NOT NAMED | coord: 561..884 coord: 909..1077 |
IPR035500 | Nuclear hormone receptor-like domain superfamily | SUPERFAMILY | 48508 | Nuclear receptor ligand-binding domain | coord: 680..714 coord: 848..883 coord: 910..1074 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk08819 ID=Tk08819|Name=Tk08819|organism=Tigriopus kingsejongensis|type=polypeptide|length=1077bp LELQTFQTSSHQPYEGDSPRYPPKSPQNAVPRSGLRLESPLNAPYPDCVS HSVVSQVPKGASSRPPHHRATHISSSTRLKIPAVSFQERSRVDFVEGEEV ISPAMKEEANSLVESTSQVEQPSSSSTFLPPGTGGTTLAHHEQEHEHQLE LRGDKERRVVGGAVLVEPSGEKATSGASGSVDDPACIGPRSIGGTREDAS LFQTKGRILREEEAEEPRSRRTRGEQQLLKKPAESRFAASCSSFNNSSGA TPHVKTSAEQALFNTHHIHHQVFRQSTDSNSNMTISSECDDERGGEMPME EDTPTPMNLSPAHRNEAFCQGLKVPSSVSQPTLCAKMRLKKQRLEAAAAA ILAANGSAVNLVKADANDNQMQTELSAKHTHTIIRNNNSAWIDQNSALHK LAEAAERKQEEEMMEIEAASAGSSTPRGGADSDTPASGSPRPHLNAIHHR LHPKLNPHMEFEVSSSGAATPTASPLTNRHVAKSNTTPSPDSAIHSAYYS PTQSPVQSRHLSGFSSPFSLHTTPSLSRNNSDASQYGGSHSSTSPLSPSQ YSPTHSPVQTRHPHFPLLPSSPLPVSRHLSLPPAYHHHHTMLDMRRSSPT ISETNENEEKPLALNASAQASGISRQQLINSPCPVCGDKISGFHYGIFSC ESCKGFFKRTVQNKKNYVCLRGAQCPITIATRKKCPACRFDKCLKTGMKL EAIREDRTRGGRSTYQCSYTLPAGICHPPSSGPSSIPLGLPSIPLPMKRE PFEGELTPIEVSSSTMANLHVSNALCRKVPDRARPHIPVSLPPTHHHAPL ERTAQDQEDLRTNSKGPRIEVPALLQEIMDVEHLWFSSRPLEARLNASGP NSELDMVQNLTVMADKRLYKLVKWCKSLPLFKNILVCPYIQDHIPSPPPT GIHGKSRSFLQIDDQIALLINAWCELLVFSCCYRSIGSPGLIRVSNEKSL SLEMAKEYGIENCVEKMLNFTDQLRRLKVDYYEYVSMKVIVLLTSDASGL KEPEHVRDSQEKVVQSLQKYTNLNYPSLPSKFGELLLRIPELQRVCQVGK EMLCPRQQSQGETPGFNLLMELLRGDH back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
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