Tk09207, Tk09207 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09207
Unique NameTk09207
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length806
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 200..221
e-value: 18.0
score: 11.1
coord: 223..246
e-value: 11.0
score: 12.9
coord: 292..315
e-value: 0.07
score: 22.3
coord: 247..269
e-value: 71.0
score: 6.3
coord: 339..360
e-value: 260.0
score: 1.6
coord: 316..338
e-value: 180.0
score: 3.0
coord: 85..107
e-value: 44.0
score: 8.0
coord: 42..62
e-value: 13.0
score: 12.3
coord: 154..176
e-value: 29.0
score: 9.4
coord: 108..131
e-value: 7.2
score: 14.4
coord: 177..199
e-value: 41.0
score: 8.3
coord: 63..84
e-value: 250.0
score: 1.8
coord: 361..384
e-value: 350.0
score: 0.6
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 338..357
e-value: 18.0
score: 11.8
coord: 108..127
e-value: 390.0
score: 1.5
coord: 269..288
e-value: 11.0
score: 13.4
coord: 154..173
e-value: 440.0
score: 1.1
coord: 177..196
e-value: 150.0
score: 4.7
coord: 223..242
e-value: 490.0
score: 0.8
coord: 292..311
e-value: 120.0
score: 5.5
coord: 62..81
e-value: 40.0
score: 9.1
coord: 85..104
e-value: 18.0
score: 11.8
coord: 41..58
e-value: 210.0
score: 3.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..799
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..607
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..806
NoneNo IPR availablePANTHERPTHR44625FAMILY NOT NAMEDcoord: 7..547
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 16..173
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 130..398
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 64..121
e-value: 4.0E-7
score: 29.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 294..315
score: 7.774
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 225..246
score: 6.919
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 156..178
score: 5.871
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 271..292
score: 5.733
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 202..223
score: 6.549
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 340..361
score: 5.764
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 248..269
score: 5.217
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 64..86
score: 6.441
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 41..62
score: 6.942
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 363..385
score: 5.063
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 179..200
score: 5.871
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 110..131
score: 6.441
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 317..338
score: 5.286
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 87..108
score: 6.711
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 11..123
e-value: 2.0E-26
score: 94.4
coord: 124..212
e-value: 4.8E-22
score: 80.1
coord: 213..306
e-value: 8.6E-24
score: 85.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 307..411
e-value: 2.0E-15
score: 58.6

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold432_size172395-processed-gene-0.6-mRNA-1snap_masked-scaffold432_size172395-processed-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09207 ID=Tk09207|Name=Tk09207|organism=Tigriopus kingsejongensis|type=polypeptide|length=806bp
MSCWPACLRCAPSPEPEVAELDLAHCSLDHVPIDLFVYERTLERLCLDYN
NIQDLPRQLFHCQELKELSVSDNDLHQLPSALASLVHLTKLNVAKNVLTD
IPDTIKQLKCLQVLDVSVNPLQKIPEGCTQLLNVTELYLNDTFLEFLPAN
FGRLVKLRILELRENGLHALPKSLARLTELERLDIGQNDFGELPDVLGSL
VNIQELWLDANHIQVIPAFIGRLSKLNHLEASFNHLEQISEEIGLCSDLE
HLSLTTNDLKFLPHQIGGCQRLITLKVDDNQLESVPQSIGQLKRLEELIL
SQNDLETIPSSIGLCRRLHTLNVDDNDVEFLPKELGSCAALKILSAHGNR
LTTLPAELDHITGLSVINLTANMIQHLPVSFMRLRQITALWLSENQTQPL
VQLNQDTDPETGQRVLTNFLLPQVPESEGHLDAVSESGSFHASVWEEERP
KKTLVKWAGEEGLGPTHDNPGLDDSREDKSGGHLRREPTPFPKEMRAMAK
RAQALRSKEPRPNGHGSHHLPSHEAPTQASQTKSASGWTATAVDSTSPAS
ESHHGSVHIREAKVSRPQAAQANLALANGVGLEPHPGDVSFELTQPNAGS
SSRIPSRAVAKRTPGPLSERGSRDSGVATPSESSPDPTDPNHRHPSDPLP
RRPELAQAGGMPNGSNRLIPPPYHIAAAFSKRAGDFQPGGNVPNHSASDT
NSVSESEVSTTASSLQTIVRAPTQGPSGGSRLNRSFQASPLSRVPDGGEK
DAHALELRKVSEQLMANPRTRQSVTGSALIHSSSSRPGSFASPSGSTPIS
MVPYAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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