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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003591 | Leucine-rich repeat, typical subtype | SMART | SM00369 | LRR_typ_2 | coord: 200..221 e-value: 18.0 score: 11.1 coord: 223..246 e-value: 11.0 score: 12.9 coord: 292..315 e-value: 0.07 score: 22.3 coord: 247..269 e-value: 71.0 score: 6.3 coord: 339..360 e-value: 260.0 score: 1.6 coord: 316..338 e-value: 180.0 score: 3.0 coord: 85..107 e-value: 44.0 score: 8.0 coord: 42..62 e-value: 13.0 score: 12.3 coord: 154..176 e-value: 29.0 score: 9.4 coord: 108..131 e-value: 7.2 score: 14.4 coord: 177..199 e-value: 41.0 score: 8.3 coord: 63..84 e-value: 250.0 score: 1.8 coord: 361..384 e-value: 350.0 score: 0.6 |
None | No IPR available | SMART | SM00364 | LRR_bac_2 | coord: 338..357 e-value: 18.0 score: 11.8 coord: 108..127 e-value: 390.0 score: 1.5 coord: 269..288 e-value: 11.0 score: 13.4 coord: 154..173 e-value: 440.0 score: 1.1 coord: 177..196 e-value: 150.0 score: 4.7 coord: 223..242 e-value: 490.0 score: 0.8 coord: 292..311 e-value: 120.0 score: 5.5 coord: 62..81 e-value: 40.0 score: 9.1 coord: 85..104 e-value: 18.0 score: 11.8 coord: 41..58 e-value: 210.0 score: 3.6 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 765..799 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 691..740 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 593..607 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 586..806 |
None | No IPR available | PANTHER | PTHR44625 | FAMILY NOT NAMED | coord: 7..547 |
None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 16..173 |
None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 130..398 |
IPR001611 | Leucine-rich repeat | PFAM | PF13855 | LRR_8 | coord: 64..121 e-value: 4.0E-7 score: 29.6 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 294..315 score: 7.774 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 225..246 score: 6.919 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 156..178 score: 5.871 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 271..292 score: 5.733 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 202..223 score: 6.549 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 340..361 score: 5.764 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 248..269 score: 5.217 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 64..86 score: 6.441 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 41..62 score: 6.942 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 363..385 score: 5.063 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 179..200 score: 5.871 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 110..131 score: 6.441 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 317..338 score: 5.286 |
IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 87..108 score: 6.711 |
IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | 3.80.10.10 | | coord: 11..123 e-value: 2.0E-26 score: 94.4 coord: 124..212 e-value: 4.8E-22 score: 80.1 coord: 213..306 e-value: 8.6E-24 score: 85.8 |
IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | 3.80.10.10 | | coord: 307..411 e-value: 2.0E-15 score: 58.6 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk09207 ID=Tk09207|Name=Tk09207|organism=Tigriopus kingsejongensis|type=polypeptide|length=806bp MSCWPACLRCAPSPEPEVAELDLAHCSLDHVPIDLFVYERTLERLCLDYN NIQDLPRQLFHCQELKELSVSDNDLHQLPSALASLVHLTKLNVAKNVLTD IPDTIKQLKCLQVLDVSVNPLQKIPEGCTQLLNVTELYLNDTFLEFLPAN FGRLVKLRILELRENGLHALPKSLARLTELERLDIGQNDFGELPDVLGSL VNIQELWLDANHIQVIPAFIGRLSKLNHLEASFNHLEQISEEIGLCSDLE HLSLTTNDLKFLPHQIGGCQRLITLKVDDNQLESVPQSIGQLKRLEELIL SQNDLETIPSSIGLCRRLHTLNVDDNDVEFLPKELGSCAALKILSAHGNR LTTLPAELDHITGLSVINLTANMIQHLPVSFMRLRQITALWLSENQTQPL VQLNQDTDPETGQRVLTNFLLPQVPESEGHLDAVSESGSFHASVWEEERP KKTLVKWAGEEGLGPTHDNPGLDDSREDKSGGHLRREPTPFPKEMRAMAK RAQALRSKEPRPNGHGSHHLPSHEAPTQASQTKSASGWTATAVDSTSPAS ESHHGSVHIREAKVSRPQAAQANLALANGVGLEPHPGDVSFELTQPNAGS SSRIPSRAVAKRTPGPLSERGSRDSGVATPSESSPDPTDPNHRHPSDPLP RRPELAQAGGMPNGSNRLIPPPYHIAAAFSKRAGDFQPGGNVPNHSASDT NSVSESEVSTTASSLQTIVRAPTQGPSGGSRLNRSFQASPLSRVPDGGEK DAHALELRKVSEQLMANPRTRQSVTGSALIHSSSSRPGSFASPSGSTPIS MVPYAR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
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