Tk09209, Tk09209 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09209
Unique NameTk09209
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length285
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 15..77
e-value: 6.7E-22
score: 88.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 16..72
e-value: 7.4E-21
score: 73.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 13..73
score: 19.629
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 16..74
e-value: 8.43191E-22
score: 84.2172
NoneNo IPR availableGENE3D1.10.10.60coord: 2..76
e-value: 7.0E-25
score: 88.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..285
NoneNo IPR availablePANTHERPTHR24329:SF375PITUITARY HOMEOBOX HOMOLOG PTX1coord: 4..237
NoneNo IPR availablePANTHERPTHR24329FAMILY NOT NAMEDcoord: 4..237
IPR016233Homeobox protein Pitx/unc30PIRSFPIRSF000563Homeobox_Pitx/Unc30coord: 1..237
e-value: 1.7E-63
score: 213.2
IPR003654OAR domainPFAMPF03826OARcoord: 203..216
e-value: 2.0E-5
score: 24.1
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 48..71
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..77

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold432_size172395-snap-gene-0.18-mRNA-1maker-scaffold432_size172395-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09209 ID=Tk09209|Name=Tk09209|organism=Tigriopus kingsejongensis|type=polypeptide|length=285bp
LDDSKDGSTKKDKRQKRQRTHFTSQQLQELEALFTRNRYPDMSTREEISL
WTNIAEPRVRVWFKNRRAKWRKRERHLLNAAGDFSKAAVVAASAGGFGTQ
FNTLMPQSPFDDSLYPGCYSTYNNWAAKATPALTKGFTWGLSAMGHHNQG
FNSMMTSTTTAGSPLSVGGGAPAATTASTSPPYPYGSSSGYSMYNMAAAA
SSMSTSIASLRLKAKQVGVVNGFGGGNSVNTLASFSELSNLEQKEVSGEG
QGDNSMMACQYDVGGGSQGESQNEDSRNIKTGHVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR016233Homeobox_Pitx/unc30
IPR003654OAR_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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