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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 226..246 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 581..603 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 567..603 |
| None | No IPR available | SUPERFAMILY | 55753 | Actin depolymerizing proteins | coord: 785..873 |
| None | No IPR available | SUPERFAMILY | 55753 | Actin depolymerizing proteins | coord: 1233..1317 |
| None | No IPR available | SUPERFAMILY | 55753 | Actin depolymerizing proteins | coord: 1348..1418
coord: 1449..1506 |
| None | No IPR available | SUPERFAMILY | 55753 | Actin depolymerizing proteins | coord: 946..1037 |
| None | No IPR available | SUPERFAMILY | 55753 | Actin depolymerizing proteins | coord: 1018..1033
coord: 1108..1226 |
| IPR007122 | Villin/Gelsolin | SMART | SM00262 | VILL_6 | coord: 924..1032
e-value: 0.48
score: 10.3
coord: 1107..1217
e-value: 7.3E-7
score: 38.8
coord: 1235..1336
e-value: 0.31
score: 12.6
coord: 790..891
e-value: 3.8E-8
score: 43.1 |
| IPR007122 | Villin/Gelsolin | PANTHER | PTHR11977 | VILLIN | coord: 110..1581 |
| IPR003128 | Villin headpiece | SMART | SM00153 | VHP_1 | coord: 1546..1581
e-value: 1.7E-8
score: 44.2 |
| IPR003128 | Villin headpiece | PFAM | PF02209 | VHP | coord: 1546..1581
e-value: 1.1E-9
score: 38.1 |
| IPR003128 | Villin headpiece | PROSITE | PS51089 | HP | coord: 1518..1581
score: 18.259 |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily | GENE3D | 3.40.20.10 | | coord: 932..1035
e-value: 2.6E-12
score: 48.7 |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily | GENE3D | 3.40.20.10 | | coord: 783..897
e-value: 8.5E-20
score: 72.9 |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily | GENE3D | 3.40.20.10 | | coord: 1237..1338
e-value: 2.1E-9
score: 39.4 |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily | GENE3D | 3.40.20.10 | | coord: 1100..1236
e-value: 3.6E-33
score: 116.3 |
| IPR036886 | Villin headpiece domain superfamily | GENE3D | 1.10.950.10 | | coord: 1515..1581
e-value: 1.7E-22
score: 81.1 |
| IPR036886 | Villin headpiece domain superfamily | SUPERFAMILY | 47050 | VHP, Villin headpiece domain | coord: 1517..1581 |
| IPR015628 | Supervillin | PANTHER | PTHR11977:SF45 | SUPERVILLIN | coord: 110..1581 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk09540 ID=Tk09540|Name=Tk09540|organism=Tigriopus kingsejongensis|type=polypeptide|length=1581bp
MRSLFTSTSSLDQSRPSGLKRTESAKSYHFRSSAMESTYNSPDASNGQSP
IGSNSLASQSILKNKTNVLGARANSSTGHLEGGGEDAPAFSESSGLPGGS
GMRRRSSLVKYDSFDSTESSGLLFHRSSLRGVLKKDSSYDEILRPILKNA
DECPSNPVSQVTSSSSSEDLPRNSQFSDVIIDPVRATGAGAASAFSRKSS
LKDLQPRQPVIPISNIRISSDDPNLASTLEELSSQAENIIKQQELQGSSA
PSGEEYTFDATTDLSNRRASSASKSQIANRRSVFARSTTKSQDEFGSKSK
NATTTELPAATSSSMSGNPDQGSRILLECQNSVWRTQTKDPGLCDQDDSI
LIGDCDSSPTDDDCPIHSDMDRKSCAGGIAERMAALQKSGEENWKKKVPR
LVDNKNAHPVMDILNSNNAVNLNVCDKENNQVPGGNESLTLANGRPVSIR
DRQDKLQQAGDFTPNRNPIKLLDEEESLSEAGVVLRRTAPRPTDDSLLIT
GEPSRVRPVSIHDRLNKLQVSSQSWQGRVGDKDVSKFTVAGKMQSDSHRS
KSTIESPNLLLVEGHRDTPRATSFSPKTPRRVPNEESDLWSSDRVKGTPK
PRAFRGLDVDLSQIQASSRSLNNGERKPVMYIEEQLQSDQGMDEFFASLC
LPSLQQSPPLFEDGLRPEVLDEFDFDSIQPVDSRPLSMPRKATVKANPNR
RRTRNPVKLLSARTDLKVLTTQVPIELEDSPPASPQVELRRNNGNQKQAH
LADEAIAGLAAKEDFSAVQLRKSSKMDQCPGMVVEHLPYKPLMLLQVKGR
RWCQTRLVEPVAQSINSGDAFVLVTRNKLFNWQGKYANVIEKARSAEIAL
SICQKHDLGCKAAFKVHTLEQEKLFGTSKAELDFWSLLGEKSMEDEVTFQ
PRAAGPPEEDEQFELAINDLNLVWEVAIYNGYEELIPVDNFWGCTPKHEL
LNPAKVLVIDYGPEVYLWNGSNAGFELRKAGLNLLKKVWDSGFDGAHPLM
TESHETRPPWGIMGKVNQNMETVLFKEKFQDWPDQAKATRVKPIEVKLAK
LIDSNLSGEIDVQPFDADLMHSWVIEDPNLELENSFLGRGRGYYDPSERR
KYELETVSLKVHHVNEYNITELADDWRGQFHSEDTYVVRWTYKVSLTGRD
LKGRPSKHAAVGRERCCYFFWQGFDSKTTEKGASALMTVEMDREEGPQMR
VDQGKEPAAFLNLWQGHMVIHKGRRGQSRHVKAAWRMFILRGECSEEACL
VEVPVKAANLRSIASFLLVHPTDGKVIVWQGSSSPEHTQALAIEAAEHIV
HTKPLEMGIPPGQHVRMEIDLEGSEGSTCQSALGLPSHRDFENRLAAPTR
TPRLFHMSSVATGHFNVMEALCPFRKMDVLNTMPFSQDDLYQADQPALFL
LDVGSKLWLWQGYWPEVPEDLTADQHQEENPNSANNNITGSGMIRWHAER
RAAMQTAVEYRRLRYGLGSRTPKAELVWAGSEPLTFTNLFPFWKDTREAK
KLNEEHVKHSDLEMTLAALSKTEYTWEQLHQSPLPDGVDPAKLERYLSED
EFQSQLGFSKKDFMTFPRWKQIEIRKEKGLF back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051015 | actin filament binding |
| GO:0003779 | actin binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007010 | cytoskeleton organization |
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