Tk09670, Tk09670 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk09670
Unique NameTk09670
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length402
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000301TetraspaninPRINTSPR00259TMFOURcoord: 79..102
score: 28.1
coord: 154..182
score: 25.68
coord: 127..153
score: 27.11
IPR008952Tetraspanin, EC2 domain superfamilyGENE3D1.10.1450.10coord: 190..280
e-value: 3.4E-9
score: 38.4
IPR008952Tetraspanin, EC2 domain superfamilySUPERFAMILY48652Tetraspanincoord: 200..278
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 78..302
e-value: 4.6E-34
score: 118.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..329
NoneNo IPR availablePANTHERPTHR19282:SF233CD63 ANTIGENcoord: 77..304
NoneNo IPR availablePANTHERPTHR19282TETRASPANINcoord: 77..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..304
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..158
NoneNo IPR availableTMHMMTMhelixcoord: 282..304
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold84_size396325-snap-gene-0.16-mRNA-1maker-scaffold84_size396325-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk09670 ID=Tk09670|Name=Tk09670|organism=Tigriopus kingsejongensis|type=polypeptide|length=402bp
MSYFGPPKLGDHRRHHRRHHRRHHRGSQHRNSRGLVVAPLEPNKRGLRTR
LHRPETPPARWAGASPAVMSRCCLDLAKFLLFIINFAAWLVCGALLATSF
YVFVNAQGLLGFPIRPDLSPENETALYFIFFLMLWIVLGFCFIFTFLGCC
GAACQNRCMLGSFIIILFVFLGANVGAIAYMYVEFPSELAMMSAELKKTI
PYYDVVDLNSIVRTFWDLVQPGLECCGAESFRDWTQATGLRPGRKVPGSC
CRPGEESDCVYQPEGSTAYLDGCIERMATPLQAAFWAVPTALALVLLLAL
CVCTRGDRSNRRERSAAGPRRRNKRADSQLSQYSEETGYIYRGGQEALAA
YPSAPPYHGDVDPRRVDSYPTGVIPPSGHDYHQPLIQPPSYHDVMARRNN
HY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR008952Tetraspanin_EC2_sf
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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