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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 106..127 score: 36.13 coord: 269..292 score: 24.75 coord: 151..173 score: 38.69 coord: 187..208 score: 30.34 coord: 448..472 score: 33.02 coord: 73..97 score: 23.76 coord: 485..511 score: 35.12 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | SMART | SM01381 | 7TM_GPCR_Srsx_2 | coord: 82..518 e-value: 4.6E-5 score: -34.8 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 88..503 e-value: 6.9E-77 score: 258.2 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 157..173 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 236..299 e-value: 1.0E-98 score: 332.9 coord: 442..517 e-value: 1.0E-98 score: 332.9 coord: 78..214 e-value: 1.0E-98 score: 332.9 |
None | No IPR available | GENE3D | 1.20.120.10 | | coord: 300..309 e-value: 1.0E-98 score: 332.9 coord: 331..441 e-value: 1.0E-98 score: 332.9 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 565..590 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 566..590 |
None | No IPR available | PANTHER | PTHR24247 | 5-HYDROXYTRYPTAMINE RECEPTOR | coord: 55..527 |
None | No IPR available | PANTHER | PTHR24247:SF134 | OCTOPAMINE RECEPTOR OAMB | coord: 55..527 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 135..145 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 473..483 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 484..506 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 75..96 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 168..187 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 188..208 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 108..134 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..74 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 209..267 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 288..450 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 507..590 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 268..287 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 146..167 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 451..472 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 97..107 |
None | No IPR available | CDD | cd15063 | 7tmA_Octopamine_R | coord: 72..514 e-value: 3.15658E-107 score: 320.982 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 266..300 coord: 62..221 coord: 434..527 |
None | No IPR available | TMHMM | TMhelix | | coord: 452..474 |
None | No IPR available | TMHMM | TMhelix | | coord: 74..96 |
None | No IPR available | TMHMM | TMhelix | | coord: 484..506 |
None | No IPR available | TMHMM | TMhelix | | coord: 108..130 |
None | No IPR available | TMHMM | TMhelix | | coord: 188..210 |
None | No IPR available | TMHMM | TMhelix | | coord: 145..167 |
None | No IPR available | TMHMM | TMhelix | | coord: 267..289 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 88..503 score: 41.395 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10163 ID=Tk10163|Name=Tk10163|organism=Tigriopus kingsejongensis|type=polypeptide|length=590bp MNESIDSYVLIVDDDSDDDAIGPEPNNHQPGSSSLHDLNFTLFELSNQST VSWIKNCSNAFENIDLEDPRVLGSLVPLGIICLVVIFGNIMVIAAVKMTH KLRGATNLFIVSLAWADLMLGMVVLPFSAMYEVFDIWIFGRIWCSIWLAM DVWVCTASILHLVVISLDRYIAVTHPITYPNIMTSNRAKLLIVGAWVLSF VICFPPLVGWNDESSPAMWVPAEFTVANLVAQGGTNSSSSFHLNNNPDVL AILSRCMPQCKLIQEPGYVIYSAVGSFYAPMLVMMFFNWRIYRTAKKTTK AIRQGWTKVKVGGANAVGMGIHRGGGGAMSMANLTTIQNNAKTSRRSSMA RPSNALNPSSRRPSASGIVLSSSTILSSGAGKPNHPAQARSTDDLHHSRL SAHASNHGSVNNLTQNLIQQHTCGGSANKFGKRNIKNQVRRFRMETKAAK TLGIIVGCFICCWFPFFTMYLITAFCEDCFPELAFSIIFWMGYCNSAINP FIYAMFSREFRGAFKKILCKFLCNKNEPRGGALVRMGLPFAPQTVAIGLT DRFSPAVLTVGGGHLQNGHNGLNDNPSSSNSDSMKTKKIT back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
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