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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PRINTS | PR00047 | STROIDFINGER | coord: 49..57 score: 57.99 coord: 16..31 score: 57.2 coord: 57..65 score: 57.94 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | SMART | SM00399 | c4gold | coord: 1..68 e-value: 3.5E-36 score: 136.2 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PFAM | PF00105 | zf-C4 | coord: 2..67 e-value: 1.3E-30 score: 105.5 |
IPR001628 | Zinc finger, nuclear hormone receptor-type | PROSITE | PS51030 | NUCLEAR_REC_DBD_2 | coord: 1..72 score: 19.56 |
IPR013088 | Zinc finger, NHR/GATA-type | GENE3D | 3.30.50.10 | | coord: 1..92 e-value: 2.3E-33 score: 116.4 |
None | No IPR available | GENE3D | 1.10.565.10 | | coord: 93..153 e-value: 1.2E-7 score: 33.3 |
None | No IPR available | PANTHER | PTHR24084 | FAMILY NOT NAMED | coord: 1..89 |
None | No IPR available | PANTHER | PTHR24084:SF24 | ESTROGEN-RELATED RECEPTOR SPLICE VARIANT | coord: 1..89 |
None | No IPR available | PANTHER | PTHR24084:SF24 | ESTROGEN-RELATED RECEPTOR SPLICE VARIANT | coord: 102..153 |
None | No IPR available | PANTHER | PTHR24084 | FAMILY NOT NAMED | coord: 102..153 |
None | No IPR available | CDD | cd07170 | NR_DBD_ERR | coord: 1..88 e-value: 1.29643E-58 score: 175.048 |
None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 1..83 |
IPR035500 | Nuclear hormone receptor-like domain superfamily | SUPERFAMILY | 48508 | Nuclear receptor ligand-binding domain | coord: 71..153 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10558 ID=Tk10558|Name=Tk10558|organism=Tigriopus kingsejongensis|type=polypeptide|length=153bp LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRK ACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLS LEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIG WAK back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0003700 | DNA-binding transcription factor activity |
GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
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