Tk10637, Tk10637 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10637
Unique NameTk10637
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length324
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001289Nuclear transcription factor Y subunit APRINTSPR00616CCAATSUBUNTBcoord: 224..246
score: 86.47
coord: 255..278
score: 71.76
IPR001289Nuclear transcription factor Y subunit ASMARTSM00521cbf3coord: 220..281
e-value: 2.6E-35
score: 133.3
IPR001289Nuclear transcription factor Y subunit APFAMPF02045CBFB_NFYAcoord: 223..278
e-value: 7.4E-28
score: 96.8
IPR001289Nuclear transcription factor Y subunit APANTHERPTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDcoord: 46..287
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 221..281
score: 37.193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR12632:SF6NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHAcoord: 46..287
IPR018362CCAAT-binding factor, conserved sitePROSITEPS00686NFYA_HAP2_1coord: 226..246

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1028_size131186-processed-gene-0.32-mRNA-1snap_masked-scaffold1028_size131186-processed-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10637 ID=Tk10637|Name=Tk10637|organism=Tigriopus kingsejongensis|type=polypeptide|length=324bp
LESPVARHSDCAPARVPAGRFPIHGPAAPAQPPTRRPLEASPDQMIQTSQ
GHQIIQTHNGQQILVQTLNQPATTLASGQTIQVTTSEGGMQSMPTFTVQA
NGITTTAGSPIVLQPSGAQPQVIQTPDGQTLIYQPVVSDASGVNVVPAGT
VQALAQGGQIIQLPNGTAATPISHPSVVVSSASSINHGNGHNAGNIIMMV
PGSNGAPALQRIPLPGPEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGR
IPKERKKYLHESRHLHALKRVRGEGGKFNSNEGYDQEPLDKKPVIDGLHN
GHHTTVSMAQYNDGSSVLNTLNLS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001289NFYA
IPR018362CCAAT-binding_factor_CS
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0016602CCAAT-binding factor complex
Add to Basket