Tk10655, Tk10655 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10655
Unique NameTk10655
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length400
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 369..391
e-value: 0.033
score: 23.3
coord: 341..363
e-value: 0.002
score: 27.4
coord: 313..335
e-value: 0.01
score: 25.0
coord: 284..307
e-value: 0.069
score: 22.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 343..363
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 286..307
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 315..335
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 371..391
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 313..340
score: 13.152
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 369..396
score: 12.757
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 284..312
score: 15.209
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 341..368
score: 15.895
NoneNo IPR availableGENE3D3.30.160.60coord: 365..396
e-value: 9.6E-11
score: 43.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 284..307
e-value: 0.0063
score: 16.8
coord: 341..363
e-value: 2.8E-4
score: 21.1
NoneNo IPR availableGENE3D3.30.160.60coord: 313..334
e-value: 1.6E-7
score: 33.1
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 369..393
e-value: 0.018
score: 14.9
NoneNo IPR availableGENE3D3.30.160.60coord: 283..312
e-value: 3.4E-9
score: 38.4
NoneNo IPR availableGENE3D3.30.160.60coord: 335..364
e-value: 2.4E-14
score: 54.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..248
NoneNo IPR availablePANTHERPTHR44944FAMILY NOT NAMEDcoord: 279..397
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 322..378
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 284..335

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold627_size122700-snap-gene-0.38-mRNA-1maker-scaffold627_size122700-snap-gene-0.38-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10655 ID=Tk10655|Name=Tk10655|organism=Tigriopus kingsejongensis|type=polypeptide|length=400bp
MPSDSNSANSATQIDTSDSHYFYETNSNDQNPAARNIQEMSPFSHHVHMS
TKLASNCGNSNTNSPIAPECNQNMKVQMNPQSPHPCIYTPPPSRPLSTMN
LNQPSSSLSYPSQAYMNATQSPTSALYSMDLYHGGNNSAPSHHLQHHGNS
TGDTQNVQAIQARPDLQGNLACSSVPSMYSENMISNQPHPGDMYHVQYGS
YDYNGGQPLEDFNNSTMYGMGDGNAGNTYPGSVPLTREFANSTSSSSREE
YHHSSKSDTKSHLSVSDQGNLGSSAVSDSGLGEYKCNDCNKVFTRICYLK
QHNKSFHNGEKPYKCAQCGKRFPVEMLYQEHLAKHAGDKPYKCDVCPKQF
NHKTDLRRHMCLHTGEKPFSCDVCGKGFIREDRMIKHSDTHKKKQPLIIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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