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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 2..22 |
| None | No IPR available | GENE3D | 1.20.1640.10 | | coord: 261..440
e-value: 1.3E-8
score: 36.5 |
| None | No IPR available | GENE3D | 1.20.58.1850 | | coord: 441..525
e-value: 4.5E-16
score: 60.7 |
| None | No IPR available | PANTHER | PTHR10796:SF92 | PATCHED-RELATED, ISOFORM A | coord: 282..442 |
| None | No IPR available | PANTHER | PTHR10796 | PATCHED-RELATED | coord: 282..442 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 131..151 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 364..383 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 336..340 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..102 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 265..283 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 411..415 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 126..130 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 244..264 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 416..439 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 309..314 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 341..363 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 284..308 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 315..335 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 440..532 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 152..243 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 103..125 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 384..410 |
| None | No IPR available | SUPERFAMILY | 82866 | Multidrug efflux transporter AcrB transmembrane domain | coord: 288..439 |
| None | No IPR available | TMHMM | TMhelix | | coord: 74..96 |
| None | No IPR available | TMHMM | TMhelix | | coord: 130..152 |
| None | No IPR available | TMHMM | TMhelix | | coord: 103..125 |
| None | No IPR available | TMHMM | TMhelix | | coord: 388..410 |
| None | No IPR available | TMHMM | TMhelix | | coord: 417..439 |
| None | No IPR available | TMHMM | TMhelix | | coord: 344..366 |
| None | No IPR available | TMHMM | TMhelix | | coord: 283..305 |
| None | No IPR available | TMHMM | TMhelix | | coord: 315..337 |
| IPR016137 | RGS domain | SMART | SM00315 | RGS_3 | coord: 434..532
e-value: 0.0056
score: 19.2 |
| IPR016137 | RGS domain | PFAM | PF00615 | RGS | coord: 442..513
e-value: 5.3E-12
score: 45.9 |
| IPR016137 | RGS domain | PROSITE | PS50132 | RGS | coord: 445..496
score: 13.425 |
| IPR003392 | Protein patched/dispatched | PFAM | PF02460 | Patched | coord: 281..439
e-value: 4.3E-62
score: 210.3 |
| IPR036305 | RGS domain superfamily | SUPERFAMILY | 48097 | Regulator of G-protein signaling, RGS | coord: 440..513 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10660 ID=Tk10660|Name=Tk10660|organism=Tigriopus kingsejongensis|type=polypeptide|length=532bp
MLQKLNRKKDEGKQKNALLSRKNCEENCLLSPLSTLHGVQCAGVSDGDNK
PIPLPAPWKSCLLPAIGANPRPKFATFEALATSAVTIVTFVALKAFPMAN
ATFVALSISALATFVALTTSAVSLATFKALAATRCVLAASCCVLLALCRV
LPALHRIIRKDLGMKSWVVTKVQGLTPNQRQKRFDRCKILLNRLKRGSKH
VLIFSDEKIFTIDAVSNSRSLRYIAQTPEDVKPVIKFTGRTKHLASALML
GIVGSDGKAFLPVWTKGTLKMDQYMSMLALKFILVLPTTIQCVSVAAVIM
MIIALVFIPKPICAIWVAFSIISIELGVIGLMSLWSVTLDSISMINLIMC
IGFSVDFSAHISYHFMAKSNLDKDERVSDCMHALGLPITQGAISTILGVI
GLALAPSYIFVIFFKMVFLVIFLGALHGLFLLPVLLTAFEGNNDGRALFR
AFLQKEYAEENLDFVIKVGAYRTCSPRKRAKMAWKLYRTFIAIGAPHELN
LDILSRKTLSESSVEPSGHANNSCSVNYLRSE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
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