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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR006050 | DNA photolyase, N-terminal | PFAM | PF00875 | DNA_photolyase | coord: 14..175
e-value: 6.5E-44
score: 149.7 |
| IPR006050 | DNA photolyase, N-terminal | PROSITE | PS51645 | PHR_CRY_ALPHA_BETA | coord: 12..144
score: 39.397 |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | GENE3D | 3.40.50.620 | | coord: 15..141
e-value: 6.9E-95
score: 320.2
coord: 183..224
e-value: 6.9E-95
score: 320.2 |
| None | No IPR available | GENE3D | 1.25.40.80 | | coord: 225..310
e-value: 6.9E-95
score: 320.2
coord: 142..182
e-value: 6.9E-95
score: 320.2 |
| None | No IPR available | GENE3D | 1.10.579.10 | | coord: 317..535
e-value: 4.0E-88
score: 296.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 505..546 |
| None | No IPR available | PANTHER | PTHR11455 | CRYPTOCHROME | coord: 13..540 |
| None | No IPR available | PANTHER | PTHR11455:SF30 | SUBFAMILY NOT NAMED | coord: 13..540 |
| IPR005101 | Cryptochrome/DNA photolyase, FAD-binding domain | PFAM | PF03441 | FAD_binding_7 | coord: 300..496
e-value: 6.6E-78
score: 260.7 |
| IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily | SUPERFAMILY | 48173 | Cryptochrome/photolyase FAD-binding domain | coord: 209..501 |
| IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily | SUPERFAMILY | 52425 | Cryptochrome/photolyase, N-terminal domain | coord: 14..226 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10665 ID=Tk10665|Name=Tk10665|organism=Tigriopus kingsejongensis|type=polypeptide|length=546bp
MAEEIPPGTAMGSAIHWFRKGLRLHDNPALLAALEQPLELRPLFILDPHF
VRSSPSSHVGINRWRFLQETLQDLDTQLRARGSRLFVARGQPEVILPGLF
EAWQVKVLTFELDTEPYALARDARIETLAQARGIQVEQRVSHTLYSPQVV
IQANQGKAPLTYVSFQKTCDKLSPPPQPLAFPATLPKVAQVSDSSLLNDP
AYQPPDLQELGVDASLLKPVKFPGGEIEGRRRLHEYVGEKRAQWVRAFEK
PKTSPNSLEPSTTVLSPYLKFGCVSAREMYWRLQAILKKGPHSQPPVSLI
GQLLWREFYYVVGAHTPNFDRMAGNSVCRQIPWDVNDEYLQAWTHARTGY
PWIDAVMTQLRDEGWIHHLARHAVACFLTRGDLYLSWEQGQTVFEELLLD
ADWALNAGNWMWLSASAFFHQYYRVYSPVVFGKKTDPNGDYIRKYLPRLK
KFPNNYIYEPWKAPLSVQKAANCIIGTDYPRPIVDHDRIHKINIGRHKAA
YAKGKDEAIAKSPATAKSPAATKVKRKEAPPSTSGPISKYLKRKKV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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