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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 679..706 |
| None | No IPR available | PANTHER | PTHR45030 | FAMILY NOT NAMED | coord: 217..444
coord: 458..621 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..660 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 680..766 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 661..679 |
| None | No IPR available | TMHMM | TMhelix | | coord: 657..679 |
| IPR000477 | Reverse transcriptase domain | PFAM | PF00078 | RVT_1 | coord: 456..581
e-value: 8.1E-10
score: 38.5
coord: 227..406
e-value: 2.0E-21
score: 76.5 |
| IPR000477 | Reverse transcriptase domain | PROSITE | PS50878 | RT_POL | coord: 78..408
score: 10.208 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10672 ID=Tk10672|Name=Tk10672|organism=Tigriopus kingsejongensis|type=polypeptide|length=766bp
MASWVASKLVKEVVELVMRSIRFWMLARDAAAAATATTPAATPPKPKAKS
TTIWKSSVKRKLHFDREKVPAHRSNTLEGILLRMGNDALDLMEIRDRAPP
GKEYRRLRNQVSSMVKRDKLRTNLDKLRKSHNDPKVLWGLANAALGKPPN
ASLPTSLLVNGIATVGSDETAQAMNHFFIDKVDKLRQNLAHVSAPSSDWP
ASSKPFSFSFASAAIANAQAQWLKGSQGGNVVGVLAFDLSSAFDTVDKAQ
LIPKLAALGIKGTALSWFDSCLSGGRQCVDWSGTRPSFADVTFGVRQGSI
IGPCLFLVLMADLPDCLGIGEECNVGYADDVSIWAVGKDLPTVKSLLDQR
AESFARFAAGNGLIMNASKTQLMLGGKVRRADLEDFHVVVDGVTVFPDKK
LELLGVKFDSSFSTFPHGASVSASARQRAAMIARLSHHLPRGAYLQQLAR
GLVLDWSGTRSSFADVTFGVRQGSILGPCLILVLMADLPDCLRIREECNV
GYADDVSIWAVGKDLPTVKSLLDQRAESFARFAAGNGLIMNASKTQLMLG
GKVRRADLEDFHVVVDGVTVFPDKKLELLGVKFDSSFSTFPHGASVSASA
RQRAAMIARLSHHLPRGAYLQQLARGLVLDEANTISQRQGEYYSSHPVRG
GGGGGILDGPIPLLAALAIGGALAAFFIFQQATEARNNLENQLNVVNNSV
NMAETDINALIASVNTAQTNANTNLNEATILCSANEAAGALPAADMAMIV
MSIDMFSAIFAGLPCP back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000477 | RT_dom |
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