Tk10676, Tk10676 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10676
Unique NameTk10676
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length594
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002909IPT domainSMARTSM00429iptmega2coord: 285..372
e-value: 0.0036
score: 26.6
IPR002909IPT domainPFAMPF01833TIGcoord: 286..355
e-value: 4.0E-9
score: 36.3
IPR032201Transcription factor COE, helix-loop-helix domainPFAMPF16423COE1_HLHcoord: 372..414
e-value: 4.2E-18
score: 64.7
IPR032200Transcription factor COE, DNA-binding domainPFAMPF16422COE1_DBDcoord: 64..269
e-value: 8.8E-93
score: 309.8
IPR032200Transcription factor COE, DNA-binding domainCDDcd11606COE_DBDcoord: 56..270
e-value: 5.36471E-116
score: 341.72
IPR038173Transcription factor COE, DNA-binding domain superfamilyGENE3D2.60.40.3180coord: 29..269
e-value: 1.5E-94
score: 317.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 270..370
e-value: 2.4E-22
score: 80.9
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 374..419
e-value: 4.7E-17
score: 63.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..519
IPR003523Transcription factor COEPANTHERPTHR10747TRANSCRIPTION FACTOR COEcoord: 55..503
IPR018350Transcription factor COE, conserved sitePROSITEPS01345COEcoord: 183..192
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 286..369

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold261_size233860-snap-gene-0.12-mRNA-1maker-scaffold261_size233860-snap-gene-0.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10676 ID=Tk10676|Name=Tk10676|organism=Tigriopus kingsejongensis|type=polypeptide|length=594bp
LDIFGPGGGPSPAPDFSPTTASMMFGMAHSGLTLKAEAWPHHTHHMHHGT
PLAPAPITPEQAIALGYVVHRIEFMKQPPSNLRKSNFFNFMVSFCDRQGH
PIEVERAQFLKFIDNVEDPQGEMLKNGIKYKVVLSFPNNYKQEMIIFVRL
VDSNSKQVVEYEGNNHIRNPEMQRVLLTHEVICSRCCEKKSCGNRNETPS
DPVICDRFQLKFFLKCNQNCLKNAGNPRDMRRFQVAIGTSYNFSSPCVVN
MSENMFVHNNSKHGRKGKKVEGNILENAIYSAQMTPVIKAVCPSEGWNMG
GQVVTIIGDNFFEGLQVFFGNTPVWSELITPHALKVTTPTRSQTGPVEVM
VGFKGQKPVPNRMSVKFNYINMAESNIDFSFARLSKLVPRQPGDPESMPK
ELILRRTADLAEMFCRYPYLAAENHHPAIGYHEAVEEFSRANQNSPRAYS
DPATPPMASHVPPTTNYSHAIAAVSSVSSMAGVNHVVSSGANNMETIVSH
TNASPSPPGSIAADPVSTPPLLDALSGGVSPPSTMGKGQMASMYLHGFAA
AAVSNSPRRAQHGGAAMVPDSQQAAAYYSYPHYWYPNPAAGTVQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002909IPT_dom
IPR032201COE_HLH
IPR032200COE_DBD
IPR038173COE_DBD_sf
IPR013783Ig-like_fold
IPR036638HLH_DNA-bd_sf
IPR003523Transcription_factor_COE
IPR018350Transcription_factor_COE_CS
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Add to Basket