Tk10677, Tk10677 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10677
Unique NameTk10677
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length183
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyGENE3D2.70.170.10coord: 90..183
e-value: 3.4E-5
score: 25.0
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilySUPERFAMILY63712Nicotinic receptor ligand binding domain-likecoord: 33..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.885

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold261_size233860-snap-gene-0.10-mRNA-1maker-scaffold261_size233860-snap-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10677 ID=Tk10677|Name=Tk10677|organism=Tigriopus kingsejongensis|type=polypeptide|length=183bp
MSGTVILLLWTTSSLWGVWGEVVPKVCVSGFCLLQDYNKLEMPPGPNNVK
IELTIMDIISIDDTEFSIAVYANIGVRWAEPRLHIKEVNGTDHVQVPVAI
DSEFLRFDFYPLDAHICRLQISSNYNDRQIVFSDTILSMAERRNVVLEYS
LEISKIPDEHRKIITKSMGNYSTTGIEFYLERY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036734Neur_chan_lig-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005230extracellular ligand-gated ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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