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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013078 | Histidine phosphatase superfamily, clade-1 | SMART | SM00855 | PGAM_5 | coord: 106..244
e-value: 2.6E-9
score: 46.9 |
| IPR013078 | Histidine phosphatase superfamily, clade-1 | PFAM | PF00300 | His_Phos_1 | coord: 209..278
e-value: 9.4E-7
score: 28.6
coord: 107..176
e-value: 9.6E-11
score: 41.6 |
| IPR013078 | Histidine phosphatase superfamily, clade-1 | CDD | cd07067 | HP_PGM_like | coord: 106..280
e-value: 1.94385E-27
score: 102.015 |
| IPR029033 | Histidine phosphatase superfamily | GENE3D | 3.40.50.1240 | | coord: 97..296
e-value: 1.5E-51
score: 177.2 |
| IPR029033 | Histidine phosphatase superfamily | SUPERFAMILY | 53254 | Phosphoglycerate mutase-like | coord: 105..288 |
| None | No IPR available | PANTHER | PTHR20935 | PHOSPHOGLYCERATE MUTASE-RELATED | coord: 39..295 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 6..14 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..19 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 15..19 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..5 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 46..296 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 29..45 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 20..28 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10681 ID=Tk10681|Name=Tk10681|organism=Tigriopus kingsejongensis|type=polypeptide|length=296bp
MSESPVLLFSSSASPAINSCIGIGIGMSWSRWGGVVGLASAAVWLETRRR
DRPLGSPLVAQEARVTPAVPPPHLNPHGMIFPPSQWDANWDGREPSEDPR
PVASRHLLLIRHGQYELTGATDEARQLTDLGREQAEATGRRLAQLQLPLT
EVIQSSMTRAMETAGLIVRHLPESVTLGRPDDILREGGPIRPEPSSRWSK
QQTYHVDGARIEAGFRKYFHRAQPDQTQDSYQLMVCHANVIRYFVCRSLQ
LPPEAWLRISLMNGSITWVTIRPDGRVSVCAVGDGGHFPVELRTTT back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013078 | His_Pase_superF_clade-1 |
| IPR029033 | His_PPase_superfam |
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