Tk10719, Tk10719 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10719
Unique NameTk10719
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length418
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001085Serine hydroxymethyltransferasePIRSFPIRSF000412SHMTcoord: 5..416
e-value: 8.5E-160
score: 529.8
IPR001085Serine hydroxymethyltransferaseHAMAPMF_00051SHMTcoord: 4..413
score: 49.19
IPR001085Serine hydroxymethyltransferaseCDDcd00378SHMTcoord: 18..405
e-value: 0.0
score: 564.52
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 284..389
e-value: 2.4E-171
score: 571.7
coord: 9..32
e-value: 2.4E-171
score: 571.7
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 33..283
e-value: 2.4E-171
score: 571.7
NoneNo IPR availablePFAMPF00464SHMTcoord: 11..382
e-value: 7.0E-155
score: 515.4
NoneNo IPR availablePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 7..408
NoneNo IPR availablePANTHERPTHR11680:SF19SUBFAMILY NOT NAMEDcoord: 7..408
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 8..413

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold5103_size5010-processed-gene-0.1-mRNA-1snap_masked-scaffold5103_size5010-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10719 ID=Tk10719|Name=Tk10719|organism=Tigriopus kingsejongensis|type=polypeptide|length=418bp
MSWPIVNDATYAALEAAEIDRQNSGLQLIASENFASPAVMSATGSVFTNK
YSEGYPGRRYYGGNMVVDQVESLAIERICSLFGADHANVQPHSGANANMA
VYQALLEPGDTVLGLRLDHGGHLTHGSPVNASGLTYNFVGYGLTASDERI
DMEQVRSLALEHKPKLIVAGATAYSRIIDPEAFRSIADEVGALLMFDAAH
IAGLIVAGVHPNPMPFCDVVTFTTHKTLRGPRGGCILATEALAKQIDKAI
FPGQQGGPQEHSIAAKAVAFAEAATTEFKEYGAQIVANAQALAASLGQHG
FRVVSGGTDNHLLLVDLQPFDAELTGKEAQAVLDDAGITLNKNSIPDDPR
SPFVTSGIRIGTPAVTTQGMLEPQMAEIGSLIARALRSRDDAEAIATIRH
EVAQLCLPYAPYPDAIAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001085Ser_HO-MeTrfase
IPR015422PyrdxlP-dep_Trfase_dom1
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0035999tetrahydrofolate interconversion
GO:0019264glycine biosynthetic process from serine
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0004372glycine hydroxymethyltransferase activity
GO:0003824catalytic activity
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