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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001650 | Helicase, C-terminal | SMART | SM00490 | helicmild6 | coord: 427..507
e-value: 1.8E-23
score: 94.0 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 400..507
e-value: 2.3E-22
score: 79.4 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 402..545
score: 18.655 |
| IPR001650 | Helicase, C-terminal | CDD | cd00079 | HELICc | coord: 392..515
e-value: 1.85096E-29
score: 110.79 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | SMART | SM00487 | ultradead3 | coord: 142..381
e-value: 1.0E-38
score: 144.7 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 162..357
score: 25.196 |
| IPR011545 | DEAD/DEAH box helicase domain | PFAM | PF00270 | DEAD | coord: 148..345
e-value: 2.3E-38
score: 131.6 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 385..587
e-value: 3.6E-41
score: 143.3 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 115..360
e-value: 1.5E-59
score: 202.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 562..590 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 574..590 |
| None | No IPR available | PANTHER | PTHR24031 | RNA HELICASE | coord: 44..545 |
| None | No IPR available | PANTHER | PTHR24031:SF68 | ATP-DEPENDENT RNA HELICASE DDX51 | coord: 44..545 |
| IPR000629 | ATP-dependent RNA helicase DEAD-box, conserved site | PROSITE | PS00039 | DEAD_ATP_HELICASE | coord: 287..295 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 386..522
coord: 199..355 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10813 ID=Tk10813|Name=Tk10813|organism=Tigriopus kingsejongensis|type=polypeptide|length=590bp
MAEVQPMGLFQVQRYWSEDEGEPVQPDEVGPLKKRPRPDSAAPEIEAEVE
AEAAAASSPPPKKKKKKSAKKKKKASASELAEAGFTVLGQDLNASQTKVQ
RVLPQWLAQPDIVTVDFQEDQLGIADMPGLDEDTRRNLSQAGITRFFPVQ
RQVIPHLLPESGQRLFRPRDVCVSAPTGSGKTLAFVVPIVQAVKRRVVPG
PRALVVLPVQELAAQVAQVFHAFTAGTNLRVKLLTPQRPFEQEQQDLVRR
QPQPVQMADILITTPGRLVDHLLFTHALDWAQLRYLVIDEADRVMEAIHH
DWLGLLEGRLQRPAAYPMTVATLRAAPIPLQKLLFSATLSQNPEQLQTLN
LFEPRLFTSVVESPSSGPAALAQGFEFVGQYTTPAELQESLVVVQDPLKK
PMILQHLLRTRPMAKAIVFTNTIEHAHFLAALLQEYDLRVGEMSSQNSDK
RGRILNQLKSGKINILVSTDAMARGMDIGDVDLVVSYDAPKFIKTYIHRV
GRTARAGVAGHALTLVEAGKGERKLRNILKEANKESVVTDTVDEAALDED
EYKRASEKAAEVLKEEKAQNPARGKFRRKVKGKSSQAPKS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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