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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR009635 | Neural proliferation differentiation control-1 | PFAM | PF06809 | NPDC1 | coord: 523..562
e-value: 3.8E-4
score: 19.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 573..598 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 574..592 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 408..598 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 381..407 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..380 |
| None | No IPR available | TMHMM | TMhelix | | coord: 381..403 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10820 ID=Tk10820|Name=Tk10820|organism=Tigriopus kingsejongensis|type=polypeptide|length=598bp
MYSKSDPIWNLLVHGPEVPVELLHQHLERFMIMMVLFGQLSKLWTSPLGS
SQTSARFQVELAWREECQEEGGVWKGFDLPDSLVSSVAMTRSTQWRLVPE
IALIVLVVVQEGWADPETVDGLLLTKKSQPGVIPVNFPNNLGWSPRIHEH
VAINQYPPPAPLGHQSWATQFRVPPTPHSAPHQIRNGPFIPSHQIPPGEH
ESPPNVKKPNSIPNFPNQPVINWFKPMHANFPAPRPGVLGSHELEVKVWT
ATPQPRDIKPGEGLKSFSPTMAALTMHPHVSPATNPGASTAVPRAIPDGP
RVEQDLNQLQQLKEETQTPSVLTAPKPPQAKKEMEQVQAPAPQIEPRSSY
LKDARSEAAFEPFGMGSRTDAFTGGDRHKAILGLVIGIVFVTAFVAMGIG
LAAQCVADRVKLMKDKSVLGRMRSPNGDDETPPELNGSVPFGSSPCDRSP
SDARNGKMSNMNPPLFTGKLILHDPPGLSSSALCRTTAAAASKMTNTLFA
AQQAVIMPSPAEQVTDDLISPKYDTDDCSENEDDSDDTVYECPGLAANAT
AMEEMVVKNPFYLQGGEIGLRPTLANSSDPQPISSQSSIFHHGIKGAN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR009635 | NPDC1 |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
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