Tk10835, Tk10835 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10835
Unique NameTk10835
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length301
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..150
NoneNo IPR availablePANTHERPTHR19290:SF97BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR AMOS-RELATEDcoord: 134..269
NoneNo IPR availablePANTHERPTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDcoord: 134..269
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 216..268
e-value: 2.7E-14
score: 63.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 211..262
e-value: 4.2E-15
score: 55.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 210..262
score: 15.745
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 209..266
e-value: 3.06763E-16
score: 69.5503
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 202..267
e-value: 1.4E-20
score: 74.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 209..272

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold332_size203095-processed-gene-0.5-mRNA-1snap_masked-scaffold332_size203095-processed-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10835 ID=Tk10835|Name=Tk10835|organism=Tigriopus kingsejongensis|type=polypeptide|length=301bp
MEPTDLSLRSPKPRNPSGNCSSSPPSSNSSGLFLRNSSPEFESNLHRLLG
SDPMYPEGAPGFMESLRRVSALSDLDYLRVHPFKAPKGEGESPRKSSRKS
AFVPVQGTLTCSPETALSFGTHSADFIDYQSKALQGSASTSSSSSKPCLK
DITPKHNEANTKRQQSDGGGAANLKNATKVHHRGIPRSIPIAVSTSSLAT
KAVSEQVLKKRRLAANARERRRMDMLNKGFDRLRGVLPGLGPERQLSKYE
TLQMAQSYISELNELLDLIEEQPVEKTPFPTQDQLLRTLFTVLELRSPRC
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
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